Rhodoferax koreense: RD110_16075
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Entry
RD110_16075 CDS
T04721
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rhy
Rhodoferax koreense
Pathway
rhy02020
Two-component system
rhy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD110_16075
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD110_16075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhy03000
]
RD110_16075
Transcription factors [BR:
rhy03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RD110_16075
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HTH_24
MarR_2
RepL
Sigma70_r4
FliT
GntR
Motif
Other DBs
NCBI-ProteinID:
APW38531
UniProt:
A0A1P8JXV7
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All DBs
Position
3463165..3463887
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AA seq
240 aa
AA seq
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MDEPILTIEERAAINAGRWFSTLSPSLRHDILRCAYVKRYKDAELIAVRGEPPEEWIACA
LGAVRVSSTSVSGKQITLTYVEPGIWFGDVAIFDGDRRTHDAYAHGDTTIVCVAKADFKK
ILATHTELYEALLRLSARRIRQLFGLVEDLNTLPLRARLAKQLIHLVRSYGVQSLANAGE
VRISLQLAQEELAQLLGASRQRVNQELKAMERDEVIRIEPAGLTVRNRDALMRIVDADNN
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaccgattcttaccatcgaagagcgcgcggcgatcaacgcagggcgttggttt
tccaccctttcaccttctcttcgacacgacattcttcgatgcgcctacgtcaaacgctac
aaggacgcggaactcatcgccgtccgtggcgaaccgcccgaggaatggatcgcctgcgca
ctgggcgcggtgcgcgtcagctcgacctcggtgtcgggcaaacagatcacgctgacctat
gtggagccgggcatctggttcggcgacgtggcgatcttcgacggcgaccgtcgcacccac
gacgcctatgcgcatggcgataccaccatcgtgtgtgtggccaaggccgacttcaagaag
atcctcgccacgcacaccgaactctacgaggcgctgctgcggctttccgcgcgtcgcatc
cgccagttgttcggcctcgtggaagacctcaacaccttgccgctgcgggcgcgcctggcc
aagcaattgatccacctggtgcgcagttacggcgtgcagagcctggccaacgcgggcgag
gtgcgcatcagcctgcagcttgcgcaggaggaacttgcgcaactgctcggcgcctcgcgc
cagcgcgtgaaccaggaactcaaggcgatggagcgcgacgaggtcatccgcatcgaacct
gccggcctcaccgtacgcaaccgcgacgcgctgatgcgcatcgtcgacgccgacaacaac
tga
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