Roseovarius indicus: RIdsm_02635
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Entry
RIdsm_02635 CDS
T06222
Symbol
rsmB_1
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rid03009
]
RIdsm_02635 (rsmB_1)
Enzymes [BR:
rid01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
RIdsm_02635 (rsmB_1)
Ribosome biogenesis [BR:
rid03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RIdsm_02635 (rsmB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
FtsJ
Methyltransf_31
Methyltransf_25
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
QEW26829
UniProt:
A0A0T5PBF3
LinkDB
All DBs
Position
2761648..2762817
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AA seq
389 aa
AA seq
DB search
MTPGARVAAAIEILDQVLDGQPAEQSLTRWARGARYAGSKDRAAVRDHVFQALRCLRSFA
CLGGARTGRGLMIGALRDEGADPDTVFTGEGHAPTPLSDAERTAGSAPESEGDRLDLPDW
LVTAFGASLGEAAEPAALALRARAPITLRVNQSLKNRSQAIAMLSEDGIQATPLDIASTA
LIVHDGARRINGSTAYRDGFVELQDGSSQAAMEALDMPDGARVLDYCAGGGGKILALAAR
QSGTWFAHDADPRRMKDLPARAERAGCTVSCLSTPDTVAQAPYHLVLCDVPCSGSGTWRR
APEAKWRLTPERLAELTGLQAAILSEAATLVRPGGVLAYTTCSVLACENADVIAEFLSNS
ECWTLEFDRSWPISDDGDGFYLAHLRKPA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacccccggcgcccgcgttgcggcggcaatcgagattctcgaccaggtgcttgacggc
cagcccgccgagcaaagcctgacgcgatgggcgcgcggcgcacgctatgccggctccaag
gatagggccgccgtgcgcgaccacgtcttccaggcgctgcgctgcctgcggtcattcgct
tgtctcggtggcgcccgcaccgggcgggggctgatgatcggcgcgctgagggacgagggt
gcagacccggatacggtgttcaccggcgaaggacatgccccgacgcccctgagcgacgcg
gaacgcaccgccggatcggcgccggagtcggagggcgaccggctcgacctgcctgactgg
ctggtcacggccttcggcgcgtcgctgggcgaagcggcggagccggctgccctggcgctc
cgggcccgggccccgatcacgctccgggtcaatcaaagcctgaagaacaggtcacaagct
attgcaatgctttcagaagatggcatacaggcaactcccctcgacattgccagcacggcc
ctgatcgtgcatgacggcgcccgccggatcaacggctccacggcctatcgcgacgggttt
gtcgagttgcaggacggcagcagccaggccgcgatggaggcgctggacatgccggacggt
gccagggtgctcgactactgcgcgggtggcggcggcaagatcctcgccctcgcggcccgg
caatccggcacgtggtttgcccacgacgccgacccccggcggatgaaggatctgcctgcc
cgggccgaaagggcaggctgcaccgtcagttgcctttccaccccggataccgtggcgcag
gcgccctatcatctcgttctgtgcgatgtgccctgttccggcagcggtacatggcggcgc
gcgccagaagccaagtggcgcctgacgcccgagcggctcgcggaactgacgggccttcag
gccgcaatcctgtcggaggccgcgacgctggtacgtccgggcggtgttctggcctatacg
acctgctccgtcctggcctgcgagaatgcggacgtgatcgcggaattcctttcgaattca
gaatgctggacactggagttcgaccgctcatggccgatttccgatgacggtgacggcttc
tatctggcccatcttcgcaagcccgcgtga
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