KEGG   Rhizobium indicum: FFM53_010295
Entry
FFM53_010295      CDS       T07009                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rii  Rhizobium indicum
Brite
KEGG Orthology (KO) [BR:rii00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rii03400]
    FFM53_010295
Enzymes [BR:rii01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FFM53_010295
    5.6.2.6  RNA 3'-5' helicase
     FFM53_010295
DNA repair and recombination proteins [BR:rii03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FFM53_010295
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII PSD4
Other DBs
NCBI-ProteinID: QKK16774
LinkDB
Position
complement(2076559..2079069)
AA seq 836 aa
MDQIDSEARTLLPAAFTRWFAEKGWRPRAHQLELLARAEAGESTLLIAPTGAGKTLAGFL
PSLTDLTRRGRIPPGSAFTGIHTLYVSPLKALAIDIERNLMKPVEEMGLPVNVENRTGDT
PNAKRQRQKLNPPDILLTTPEQVALLLANREAERFFKDLKYIVLDELHSLVTSKRGHMLS
LGLARLRRLAPGLQTIGLSATVAEPMDLQKWLVGQEEGSEHHAGLVVVEGGAKPDISILS
TEERIPWAGHSARYAIPDVYNKLVEHRTTLLFVNTRSQAEMLFQALWTINDDNLPIALHH
GSLDVAQRRKVEAAMAENRLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRA
NHRMDEPSKAILVPANRFEVMECQAALDANYIGAQDTPPVGRGALDVLAQHVLGMACAEP
FDMLELYDEIISASPYADLSWETFERIVDFVATGGYALRTYERYARIRKTKEGRWRVSNP
AVAQQYRLNLGTIVESPMLNIRMVKRGEGGRIGRGGATLGKVEEYFLEQLSPGDTFVFSG
KVLRFEGIRENECLASQAFSLDPKIPSYNGGKFPLSTYLAEQVRAMIADPDRWRRLPDQV
RDWLSLQNDKSMLPKRDEFLIETFPRGSRAYMVAYPFEGRLAHQTLGMLLTRRLERIGAK
PLGFVATDYSLAIWGLEDMGLMIGNGRLSLSDLFDEDMLGDDLEAWLDESFLLKRTFRNC
AVIAGLIERRHPGKEKSGRQITVSADLIYDVLRSHEPDHILLQATRQDAATGLLDIGRLG
DMLRRIRGHITHRALDHISPLAVPVMLEIGREAVPGEAHDALLAEAADDLIAEALA
NT seq 2511 nt   +upstreamnt  +downstreamnt
gtggaccagatcgattccgaagcccgtaccctgcttcctgccgcctttacccgctggttt
gcggaaaagggctggcgaccgcgcgcccatcagctggaactgcttgcccgcgccgaggcc
ggcgaaagcacgctgctgattgcgccgaccggtgccggcaagacgctcgccggtttcctg
ccctcgctcaccgatctcacccgccgcggccggatcccgcccggctccgccttcaccggc
atccacacgctctacgtctcgccgctgaaggcgcttgctatcgatatcgagcgcaacctg
atgaagccggtcgaggagatgggcctgccggtcaacgtcgagaaccgcaccggcgatacg
ccgaacgctaagcgccagcgccagaagctcaacccgccggatattctgctgacgacgccg
gaacaggtcgccctgctgctggcgaaccgggaggccgagcgcttcttcaaggacctgaaa
tatatcgtcctcgacgagctgcattcgctcgtcacctccaagcgcggccatatgctctcg
ctcggccttgcccgcctgcgccgccttgcccccggtctccagacgatcggcctgtcggca
accgtcgccgagccgatggatctgcagaaatggctggtcggccaggaagagggtagcgaa
catcatgccggcctcgtcgtcgtcgaaggcggcgccaagcccgatatctcgatcctgtcg
accgaagagcgcattccctgggccggccattccgcccggtatgccattcccgatgtctac
aacaagctcgtcgaacatcgcacgacgctgctcttcgtcaacacccgcagccaggcggaa
atgctattccaggcgctctggacgatcaatgacgacaacctgccgatcgcgctccatcac
ggctcgctcgatgtcgcccagcgccggaaggtcgaggcggcgatggccgaaaaccggctg
cgcgccgtcgttgccacctccaccctcgatctcggcatcgactggggcgatgtcgatctc
gtcatccatgtcggcgcgccgaagggtgcctcgcgtcttgcccagcgcatcggtcgtgcc
aaccaccgcatggacgagccctcgaaggcgatcctcgtgcccgccaaccgcttcgaggtc
atggagtgccaggcagccctcgacgccaattatatcggcgcgcaggataccccgcccgtc
ggccgcggcgcgctcgacgtgctcgcccagcacgtgctcggcatggcctgcgccgagcct
ttcgacatgctggaactctacgatgaaatcatcagcgcctcgccctatgccgatctgagc
tgggagaccttcgagcgcatcgtcgatttcgtcgcgaccggcggttatgcgctgcggacc
tatgagcgctacgcccgcatccgcaagaccaaggaaggccgttggcgcgtctccaatcct
gcagtcgcccagcaataccgcctcaacctcggcaccatcgtcgaaagcccgatgctgaat
atccgcatggtcaagcgcggcgagggcggcaggatcggccgcggcggcgctacgttgggg
aaggtcgaggaatatttcctcgagcaattgtcgccgggcgataccttcgtcttctccggc
aaggtgctgcgtttcgagggcatccgcgagaacgaatgcttggcgtcgcaggccttttcg
ctcgatccgaagatcccctcctataatggcggcaagtttccgctgtcgacctatctcgcc
gagcaggtgcgggcgatgattgccgatcccgatcgctggcgccgcctgccggatcaggtg
cgcgactggctgtcgctgcagaacgacaagtcgatgctgccgaagcgcgacgagttcctg
atcgaaaccttcccgcgcggcagccgcgcctatatggtcgcctatcccttcgaaggccgt
ctcgcccaccagacgctcggcatgctgctgacccgccggctggagcggataggcgccaag
cccctcggtttcgtcgccaccgattattcgctggccatctggggcctcgaggatatgggg
ctgatgatcggcaatggccggctcagcctttccgacctcttcgacgaggacatgctcggc
gacgatctcgaagcctggctggacgaatccttcctgttgaagcgcaccttccgcaattgc
gccgtgattgcaggcttgatcgagcgccgccatccgggcaaggaaaagagcggccgccag
atcaccgtctccgccgacctgatctacgacgtgctgcgcagccacgaaccggatcacatc
ctcttgcaggcgacgcggcaggatgcggcaacggggcttttggatattggccgtcttggc
gatatgctgagacgaatcaggggccacatcacccaccgcgctctcgatcatatttccccg
ctcgccgtaccggtgatgctggaaatcggacgcgaggcggtgccgggcgaggcccatgac
gcactcctggccgaagcggcggacgatctgatcgccgaagcgctcgcttga

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