Rivularia sp. PCC 7116: Riv7116_3120
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Entry
Riv7116_3120 CDS
T02364
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
riv
Rivularia sp. PCC 7116
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
riv03019
]
Riv7116_3120
03009 Ribosome biogenesis [BR:
riv03009
]
Riv7116_3120
03036 Chromosome and associated proteins [BR:
riv03036
]
Riv7116_3120
Enzymes [BR:
riv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Riv7116_3120
Messenger RNA biogenesis [BR:
riv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Riv7116_3120
Ribosome biogenesis [BR:
riv03009
]
Eukaryotic type
90S particles
RNase
Riv7116_3120
Prokaryotic type
rRNA processing factors
Riv7116_3120
Chromosome and associated proteins [BR:
riv03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Riv7116_3120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
AFY55595
UniProt:
K9RCB4
LinkDB
All DBs
Position
complement(3881328..3882038)
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AA seq
236 aa
AA seq
DB search
MSVIYPRRQRQLESLVKKLGLPVKSPVNWELLDLALTHPSISESANYEQLEFVGDAVVRL
VAALILWEDFHDARVGDFAAIRSVLVSDRILAKLASSYGLELHLLVAGSAYGDRAGQESR
LADAFEAVLGALYLSTNSLELIRVWLDPHFKQLATEINSDPARQNYKAALQEWTQGEYKT
LPEYRVTQLASPQHNQERFIAEVWLHDKKLGEGKGRSIKAAEQAAAKIAFMAINPQ
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttatttatccacgtcgtcagcgacaacttgagagtttggtaaaaaagctaggt
ttaccggtaaaatcgcctgttaattgggaactactggatttagcgctgactcatccgtct
atttcggagtcggctaattacgaacaacttgagtttgttggcgatgcggtggtacgtttg
gtagctgctctgattctatgggaagattttcatgatgcccgtgtgggtgattttgctgca
attcgttccgtattagttagcgatcgcattcttgctaaattagctagttcttacggtttg
gagctacatttattggttgctggaagtgcttatggcgacagagcagggcaagaatcaaga
ttggcggatgcttttgaagcagttttgggagcgctttatctaagtactaatagtttggag
ttgattcgggtttggttagatccccactttaagcaacttgctacagaaatcaactcagat
ccggcaagacaaaattataaagctgctctacaagaatggactcaaggagaatataaaact
ttgcccgaatatcgcgtgactcagcttgcttcccctcagcataatcaagaacgcttcatt
gctgaagtttggctgcacgataaaaaattaggtgaaggtaaaggacgttcgattaaagca
gccgagcaagctgccgcaaaaatagcttttatggcaatcaatcctcagtaa
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