Rubripirellula lacrimiformis: K227x_49110
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Entry
K227x_49110 CDS
T07352
Symbol
omcB_4
Name
(GenBank) Large cysteine-rich periplasmic protein omcB precursor
Organism
rlc
Rubripirellula lacrimiformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
SdrD_B
SpaA
bMG10
CarboxypepD_reg
Emfourin
TRAP_beta
NPCBM_assoc
CARDB
Planc_extracel
Motif
Other DBs
NCBI-ProteinID:
QDT06501
UniProt:
A0A517NH81
LinkDB
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Position
complement(6476832..6481121)
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AA seq
1429 aa
AA seq
DB search
MTASRTIKQYGKISMVWQDILNRLGRNTKRTNRKLNQRRLRLEQMERRELMASDLGVIAG
TAFVDQDNNGVQNGTEPPVLVDGGGNLVSVGTVGATGIQVQLFNDDGTTPGTLDGSDTLA
GTTTTDANGLYRFDGLSVGSYFVQQADVPQLNTPDPVAAQVVNESGVQTALIDDFATTAV
AAQVVTAGDPDSFLTQAASEAIGDNRDILISADTGNITFQINTTTEELTVSPGAGGTGNV
QIQYDGPESTAALDPIGLQTGGVGVSLGGGAASDPVDPDAGFIALLRSEQVGDSIEVIVH
TDGGNSSIATIAIPQNVTTNQELYIPFASFTVNTGTGANFNNVGAIETNVPITVANNDVN
IGIVEAITPEIVSVNLANVQTLTLGGSVIQDNSSGGQNDGILQVSESGQVGVTVQLYQLA
GANDVVDPANDTPIATTTTGTGGLYSFPDLDPGNYAVVIPASQFGTGAPLFGFANSTGND
PIADPDDNADAVDDGTVLASGDVASGTITLESNSEPINDDDTDPNTNTTIDFGFFPQVDL
QITKTLNAANSTVVAGGNAVFDIVVENLGPLDATNVVVTDAFPAGLTFTGTTNASGSFTT
NVNGTTVTVVMGTIPAGTTATFRFNSDIDANQTADLTNTATVAGDEVETDTTNNSDDEAI
DVISTDLRIDKIDLTDPVNAGNQFTYQITVNNDGPDDAAGVVVVDPLPAGVTFVSGNVDG
ASNLVTFDSQTGEVTATVGTLANQGASVITLVVQVNADADTPLTNTASVTASPNTDPNPD
NNTTDEDTTVNRQVDVAIDKTVTGTAVAGRTVTYTVEVSNNGPGQARGVSVVDTLDADLA
FVTGSLNAGTSGVTVTQNGQTLTFDVGVLDPSQVETFSFDVTLDSDAFGVIPNTATVSTT
DDDTVPANDTDSVDINAGREIDLILDKAVDKATAVPGQDTLVYTFTVSHDTDSVSDAANV
VVTDTLPAGLAGVTITAADATSSNFANGVVTVNYSAIPVGETRTFTVTATVNADATADVV
NPATVTSSGTELDTTNNSDTVTTTLTPQFDIDVDKTVNTATPAVGSTVVYSVALTNSGPS
QAGNIVLTDVIPAGMTFVSGTLNGQAGTVSGSNVVFPAITLAPNQSATATLNFTVASTAS
GTITNTASIPDLSAAGETDLTNNSDTATVTVTPVVDLAVTKTVSDANAAAGDSLTYTVTV
VNNGPSVATNVVVTDTLPSGVTFTSGTGPTGSALSASSGVVTVNGGDLASGASLSFTIVA
TINSGVSVTQTNTAVAATDTNETNTANNTATAATTVDPLTSSIAGKVFLDVNSNGIFDTG
DTGIAGVDIRLTGTDVLGNTIDTTVQTTAAGDYLFAQLAAGTYRVVETDPAGFDDGTDTA
GTGAVSSNTANDEFNNLVIGPGATAQAFNFGELESVEPVSKRRFLASNR
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgacggcatcgcgaacgatcaagcaatacgggaagatctcgatggtctggcaagacatt
ttgaaccgtttgggccgcaataccaaacgcaccaaccgcaaactgaatcaacgccgtttg
cgtttggaacagatggaacgccgcgaattgatggcgtccgacctgggggtgattgccggt
actgcgttcgtcgaccaggacaacaacggagtccagaacggcaccgagccgcctgtgttg
gtcgatggtggcgggaacctcgtttccgtcggcaccgtgggtgccacagggatccaagtg
caactgttcaacgatgatgggacgacccccggcacgctggacggatccgatacgttggcg
ggaacgacgacgaccgacgccaatggcctgtatcgtttcgatggtttgtccgtcggatcg
tactttgtccaacaagcggacgttccacagctgaacacgcctgatccggttgccgcacaa
gtcgtcaacgaaagcggtgtgcagactgcattgatcgatgactttgcgaccaccgcagtc
gccgcccaagtcgttaccgcgggtgaccccgattccttcctgacgcaagcggcttccgaa
gcgatcggtgacaaccgcgatattctgatcagcgcggataccggcaacatcacgttccaa
atcaatacgaccaccgaagaactgacggtttcgccaggtgcgggcggtacaggaaacgtt
cagattcagtatgacggtcccgaaagcaccgcggccctggatcccatcggattgcaaacc
ggtggcgtaggcgtttcgttgggtgggggagctgccagtgacccggtggaccctgacgct
ggcttcatcgcactgctgcgatccgaacaggtgggcgattcgatcgaggtcatcgtgcac
accgatggcggcaattcgtcgatcgcgacgatcgccattcctcaaaacgtgaccaccaac
caagaactgtacatcccgttcgcgtcctttaccgtcaacaccggtaccggtgcgaacttc
aacaacgtgggtgccatcgaaaccaacgttccaatcaccgttgccaacaacgatgtgaac
atcggaatcgtcgaagcgatcactcccgaaatcgtctccgtcaacctggccaacgtccaa
acgttgactttgggcggatcggtgatccaggataactcatccggtggccagaacgacggc
attctgcaggtcagcgaatcaggccaagtcggtgtcaccgttcaactgtatcaattggcc
ggtgccaacgatgtggtcgacccagccaacgatacaccgatcgcaaccacaacgaccgga
accggtggtctgtacagtttcccggacctggaccccggaaactacgcggttgtgattcct
gcgtcgcagttcggtaccggagccccgctgtttggatttgccaacagcacgggcaacgat
ccgatcgcggatcccgacgataacgccgatgccgttgacgatggtaccgtgttggccagc
ggagacgtggccagcggaacgattaccttggaatcgaattccgagccgatcaacgatgac
gataccgaccccaatacaaacaccaccatcgattttgggttcttcccacaggtcgatttg
cagatcaccaagacactcaacgccgccaattcgacggttgtcgccggtggcaatgccgtg
ttcgacatcgtggtggaaaacctcggtcccttggatgccaccaacgtggtcgtcaccgac
gcgttcccggccggattgacgttcaccggaacaaccaatgcatcgggcagcttcacgacc
aacgtcaacggcacgaccgtcacggttgtgatgggcacgattcccgccggcacgactgcg
acgttccgattcaattcggacatcgatgccaaccagaccgccgacttgaccaataccgca
accgtggccggtgacgaagttgaaaccgacacgaccaacaacagtgacgacgaagcgatc
gacgtcatcagcaccgacttgcgaatcgataagatcgacttgacggacccggtcaacgcg
gggaatcaattcacctatcagattaccgtcaataacgacggacctgacgatgctgcgggt
gtcgtggtcgtggatcctttgccggctggtgtgacgttcgtcagtggcaacgttgatggg
gcttccaacctggtcacctttgacagccaaactggcgaagtcaccgcgaccgtcggaacg
ctcgccaaccagggtgcatcggtgatcacattggtggttcaggtcaatgcggatgccgac
accccgctgaccaacaccgcaagcgtgaccgccagccccaacacggacccgaaccctgat
aacaacacgacagacgaagacaccaccgtcaatcgtcaagtcgacgttgccatcgacaaa
acagtaaccggcaccgcagtggctggtcgcaccgtgacctacacggtcgaagtttccaac
aacggacctggccaagctcgtggcgtctccgtcgtggatactttggatgccgaccttgca
ttcgtcaccggcagcctgaacgctgggacttcgggagtcacggtcactcaaaacggccaa
accttgacctttgatgtcggcgttctggacccatcgcaagtcgaaacgttctcgttcgat
gttacgcttgattccgatgcgttcggagtgatccctaacaccgccacggtttcgaccacg
gacgacgatactgtcccggcgaacgacaccgacagcgtggacatcaatgcgggtcgcgag
atcgatttgatcttggacaaggctgtcgacaaggcaaccgccgtccctggtcaagacact
ttggtctacaccttcaccgtcagccacgacaccgatagtgtcagcgacgcggccaacgtg
gtcgtcacggacaccttgccagccggtttggcgggcgtcacgatcaccgccgccgacgcg
accagcagcaactttgccaacggcgttgtgaccgtcaactacagtgcgattccggttggt
gaaaccagaacctttacggtcaccgcgacggtcaatgccgacgcaaccgccgatgtggtc
aacccggcaaccgtcacttcgtcagggaccgagctggatacgacgaacaactcggacacc
gtcaccacgacgttgaccccgcagttcgacatcgacgtcgacaagaccgtcaacacggcg
accccagcggtcggcagcaccgtcgtctacagcgtggcgttgaccaacagcggtcctagc
caagctgggaacatcgttctgaccgatgtcattcccgctgggatgacgttcgtcagcgga
acgttgaacgggcaagccggcacggtttcgggtagcaacgttgtcttccctgcgatcact
ttggcaccgaatcaatcggccacggcgacgttgaactttacggttgcgtccaccgcgtcg
ggaacgatcaccaacaccgctagtatccccgatctttcggctgcgggtgaaaccgatctg
accaacaacagtgacaccgccacggttaccgtcactccggtagtcgacttggccgtcacc
aaaaccgtctccgacgccaacgcggcggctggcgattcgctgacctataccgtcacggtt
gtcaacaacggaccgtcggttgcaacgaatgttgtggtcaccgacaccctgcctagcggt
gtgacattcaccagcggaaccggcccgaccggatcggcattgtcggcatccagcggcgtg
gtcacggtcaacggtggcgacctagccagcggtgcatcgcttagctttaccattgtcgcc
acgatcaactcgggcgtttcggtgacgcaaaccaacaccgcggtcgctgcgaccgatacc
aacgaaaccaacacggccaacaacacggcaacggcggcaacgaccgtcgatccattgacg
tcgtcgatcgcggggaaggtgttcttggatgtcaacagcaacggaatcttcgacacgggc
gacaccggcatcgcaggagtcgacattcgtttgaccggcaccgatgtgctgggcaacacg
atcgacaccacggttcaaaccactgcggcgggtgactatctgttcgctcagttggcagcc
ggtacctaccgcgtcgtcgaaaccgatccggccgggtttgatgacgggaccgacactgcc
gggacaggggcagtctcgtccaacaccgccaatgacgagttcaataatctggtgatcggg
ccgggagccacggctcaggcatttaactttggcgaactggaatcagtcgaaccagtttcc
aaacgacgcttcttggcatcgaaccgttga
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