Rhizobium johnstonii: RL3957
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Entry
RL3957 CDS
T00402
Name
(GenBank) putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
rle
Rhizobium johnstonii
Pathway
rle04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
RL3957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rle03016
]
RL3957
Enzymes [BR:
rle01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
RL3957
Transfer RNA biogenesis [BR:
rle03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
RL3957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
QueC
Arginosuc_synth
NAD_synthase
ATP_bind_3
ThiI
Motif
Other DBs
NCBI-ProteinID:
CAK09447
RhizoBase:
RL3957
UniProt:
Q1MC84
LinkDB
All DBs
Position
complement(4180678..4181904)
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AA seq
408 aa
AA seq
DB search
MTQAELAPSLNTLDFDKKPEETRVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGA
AVHRAGSCCAGQDIDDARRVCETLGIPHYVLDYEKRFRETVINPFAESYVAGETPIPCVS
CNQTVKFADLLATAKELGADALATGHYIRSGRNPSPENPGRRALFRPADADRDQSYFLFA
TTQEQIDYLRFPLGGLPKAETRRLAEEMGLVVAKKADSQDICFVPQGKYSDVITKLKPNA
ALAGEIVHLDGRVLGTHEGILHFTIGQRRGIGIATGEPLYVVFLDARSRRVIVGPKEALE
THRVYLRDVNWLGDETLAEAAAGKGFACYAKVRSTRAPAPAVLHIDATGTYVDLTVGEAG
IAPGQACALYSAPGDNARVFGGGFIERSEREPSAEACLKALLASPVAA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaagcagaattggcaccatcgttgaacacactggattttgacaagaagccggaa
gagacccgcgtcgtcgtcgccatgtcgggcggcgtcgattcatccgtcgtcgccggcctt
ctcaaacagcagggttatgatgtgctcggcatcacgctgcagctttacgatcatggcgca
gccgttcaccgcgccggctcctgctgcgccggccaggatatcgacgatgcgcgccgcgtc
tgcgaaacgctcggcattccgcattacgtgctcgattacgaaaagcgctttcgcgagacg
gtgatcaaccccttcgccgaaagctatgtggcgggcgaaacgccgatcccttgcgtttcc
tgcaaccagaccgtcaaattcgccgatcttctggcgaccgccaaggagcttggcgccgat
gcgctggcgaccggccattatatccgctcgggacggaatccttcgcctgagaatcccggc
cgccgcgcgcttttccgcccggccgatgccgaccgcgaccagagctatttcctcttcgcc
acgacgcaggaacagatcgattatctccgctttcccctgggcggcctgccgaaggccgaa
acccgcaggctggccgaagagatgggccttgtcgtcgccaagaaggccgacagccaggac
atctgcttcgtgccgcagggcaaatattccgatgtcatcaccaagctgaagccgaatgcg
gcgctcgccggcgagatcgtccatctcgatggccgcgtgctcggcacccatgagggcatc
ctgcacttcacgatcggccagcgccgcggcatcggcatcgccaccggcgagccgctctac
gtcgtctttctcgacgcccgctcgcgccgcgttatcgtcggaccgaaggaggcgctggaa
acgcaccgcgtctacctgcgcgacgtcaactggctgggcgacgagacgcttgcggaagcc
gccgccggcaagggctttgcctgctacgccaaggtccgctcgacaagggcgccggcgccc
gccgtcctgcatatcgatgcaacaggcacctatgtcgacctgacggtcggcgaggcgggt
atcgcgcccggccaggcctgcgcgctctactcggcgcccggcgacaacgcccgcgtcttc
ggtggcggtttcatcgaacgctccgagcgcgaaccttcggcggaagcctgcctgaaggcc
cttttggccagcccggtcgctgcctga
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