Rhizobium johnstonii: RL3989
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Entry
RL3989 CDS
T00402
Symbol
ruvA
Name
(GenBank) putative Holliday junction DNA helicase
KO
K03550
holliday junction DNA helicase RuvA
Organism
rle
Rhizobium johnstonii
Pathway
rle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RL3989 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rle03400
]
RL3989 (ruvA)
DNA repair and recombination proteins [BR:
rle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RL3989 (ruvA)
RecFOR pathway proteins
RL3989 (ruvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
HHH_2
DUF1421
RecR_HhH
Chal_sti_synt_C
Motif
Other DBs
NCBI-ProteinID:
CAK09479
RhizoBase:
RL3989
UniProt:
Q1MC53
LinkDB
All DBs
Position
4214909..4215523
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AA seq
204 aa
AA seq
DB search
MIGKLKGTIDEIGEDYVLVDVHGVCYVAHCSARTLSKLGSTGEACVLFIETYVREDQLKL
FGFMTALEREWFNLLQSVQGVGAKVALAVLSTLPPGELANAIALQDRTAVSRAPGVGPKV
AMRLVTELKNRAPAFAGEAINIGLKQELGEGVAAAPVADAVSALTNLGYSRDQAANAIAA
AMKTAGEGADSAKLIRLGLKELAR
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcaagctgaaaggcaccatagacgagatcggcgaagactatgtgctcgtcgat
gtgcacggcgtctgctacgtcgcccattgttcggcccgcaccctatccaagctaggctcg
actggtgaggcctgcgtgctgttcatcgagacctatgtgcgcgaggatcagctgaagctc
ttcggtttcatgaccgcgctggagcgggaatggttcaacctgctccagagcgttcagggc
gtcggcgccaaggtagcgctcgccgtgctctcgacgctgcccccaggcgaactggcgaat
gcgatcgccctgcaggatcgcaccgccgtctcccgtgccccgggcgtcggtcccaaggtg
gcgatgcgcctcgtcaccgaactcaagaaccgggcgccggcctttgccggtgaggcgatc
aatatcggcctcaagcaggaactcggcgaaggtgtcgcggcagcaccggtcgccgatgcg
gtttccgcgctgaccaacctcggctattcccgcgaccaggcggcaaatgcgattgccgcg
gcaatgaagacggcaggcgaaggtgctgacagcgccaagctgatcaggctggggttgaag
gaactggcgcggtga
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