Rhizobium johnstonii: pRL120212 Help Entry pRL120212         CDS       T00402                                  Name (GenBank) putative DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism rle  Rhizobium johnstonii Pathway rle03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:rle00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     pRL120212  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:rle03400]     pRL120212 Enzymes [BR:rle01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      pRL120212 DNA repair and recombination proteins [BR:rle03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      pRL120212 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C RNA_ligase GPAT_C Motif Other DBs NCBI-ProteinID:  CAK11924 RhizoBase:  pRL120212 UniProt:  Q1M4P7 LinkDB All DBs Position pRL12:220723..221769 Genome browser AA seq 348 aa AA seqDB search MKRPRRPLPLLDESHSTLQSRPIRKRDPDQPSLPFDPMPSRVEPCLALLKPTVPVGPDWL YEVKLDGYRLAIHVEPKGVRVITRGGHDWTHRFPTIAAAAKELGVATAILDGEAVVLDDH GRSDFGALQRSLGGRGGKRVSTESILVAFDLLYLDGHDLTGTELEVRRHLLEDLIPEGDD RAIRLSEEIELPAEELLEHACHHHLEGIIAKHRDRPYGSGRTGDWLKIKCVQSESFMVVG YEQSASARGGIGRLLLAGRRGLDWIYVGSVGTGFGASDAEYLKKTLDRLKTSRPVVPLKG NRLVLVQPTLIAEIEFRGWTDDGNLRHASYKGLREVQDNAAVFEMTYI NT seq 1047 nt NT seq  +upstreamnt  +downstreamnt atgaagcgcccgcgccgcccactgcccttgctcgacgaatctcactcaacgctgcagtct cgtccgatccgcaagcgcgatcctgaccagcccagtctgcccttcgatcctatgccgtcg cgcgtcgagccctgccttgcactgctgaagccgactgtgcccgtcgggccggattggctc tacgaggtgaagctggatggctatcgattggcaatccacgttgagccgaagggcgtgcgg gtcatcacccgcggcggccatgactggacccaccgcttccccaccatcgccgcggcagcc aaagagcttggcgtagcaaccgccattctcgatggcgaggccgttgtactcgatgatcac ggccgctcggattttggcgccctgcagcgttcgctcggcgggcggggcggcaagcgagta tcgaccgagtcgatcctcgtcgccttcgaccttctctatctcgatggacacgatctgacc ggcaccgagcttgaggtacgccggcatctgcttgaagacctgataccggaaggcgatgat cgagcgatccgactctccgaggagatagagctgccggcagaagaactcctcgagcacgcc tgccatcatcatctggaaggcatcatcgccaagcatcgcgaccggccctacggcagtggc cgcacgggcgactggctgaagatcaaatgcgtgcagagcgagagcttcatggtcgtcggt tatgagcagtccgcatccgcccgcggcggcatcggcaggctgctgctggccggcagacga ggcctcgactggatctacgttggctccgtcggaaccggtttcggtgccagcgatgctgaa tacctgaaaaagacgctagaccggttgaagacgagccggccggtcgttccgctgaagggc aatcgcctcgtcctcgtgcagccgacgctgattgccgagatcgagtttcgcggctggacg gatgacggcaatctccgccatgcctcgtacaaggggctgcgcgaggttcaggacaacgcc gctgtcttcgaaatgacctacatctga

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