Roseobacter litoralis: RLO149_c029060
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Entry
RLO149_c029060 CDS
T01572
Symbol
rpoH1
Name
(GenBank) RNA polymerase sigma-32 factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rli03021
]
RLO149_c029060 (rpoH1)
Transcription machinery [BR:
rli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RLO149_c029060 (rpoH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
HTH_3
HTH_19
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AEI94863
UniProt:
F7ZH21
LinkDB
All DBs
Position
complement(2966436..2967332)
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AA seq
298 aa
AA seq
DB search
MANYANLPAPTPEGGLNRYMQEIRKFPLLEPQEEYMLAKRWVEEQDTEAAHKMVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSLVKLGTTSGQKKLFFNLRKAKNKIGALEEGDLHPDNVARIAKDLGVTETEVISMNRRM
SGGDASLNATVGSEGEGTMQWQDWLEDEGADQAGDYEARDELEARRELLADAMSVLNDRE
KDILQQRRLSEKTVTLEDLSAEYNVSRERIRQIEVRAFEKLQKKMRDLAKEKGMPVSA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggccaactacgcaaatctgccggcgccaacgccggaaggcggcttgaaccgctacatg
caggaaattcgcaagttcccgctgcttgagccgcaagaagaatacatgctggcaaagcga
tgggtcgaagaacaggatacggaggcggcccataaaatggtcacgtcccacctgcgtctg
gccgcgaaaatcgccatgggctaccgtggctatgggttgccgcaggctgaagtgatttcc
gaggcgaatgtcggcttgatgcaggcggtgaaacggtttgaccccgaaaaagggttccgg
ctggccacatatgcgatgtggtggatccgcgcgtccattcaggaatacatcttgcggtcc
tggtcgctggtgaaactgggcacgacctcaggtcagaagaagctatttttcaatctgcgc
aaagccaaaaacaagatcggcgcgttggaagaaggcgacttgcacccggataacgttgcg
cgcatcgcaaaggaccttggtgtaaccgagaccgaagtgatttcgatgaaccggcgcatg
tcggggggcgatgcctcactcaatgcgactgtcgggtccgagggcgaggggacgatgcag
tggcaggattggctcgaagacgagggtgccgatcaggccggtgattatgaggcgcgtgat
gagctggaagcacggcgcgagctgttggcggacgcgatgagtgttctgaatgaccgtgaa
aaagacattctgcaacagcgcaggctgtcagagaaaacggtgacgctcgaagacctcagt
gccgaatacaacgtcagccgcgaacgtatccgtcagattgaagtgcgcgcgtttgaaaag
ctgcaaaagaagatgcgtgatctggccaaggaaaagggcatgccggtttcggcctga
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