KEGG   Rhizobium lusitanum: HB780_28710
Entry
HB780_28710       CDS       T07787                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rls  Rhizobium lusitanum
Brite
KEGG Orthology (KO) [BR:rls00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rls03400]
    HB780_28710
Enzymes [BR:rls01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HB780_28710
    5.6.2.6  RNA 3'-5' helicase
     HB780_28710
DNA repair and recombination proteins [BR:rls03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HB780_28710
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII PSD4
Other DBs
NCBI-ProteinID: QND49480
LinkDB
Position
3079318..3081828
AA seq 836 aa
MDQIDSESRLALPAPFIRWFAEKGWQPRAHQLELLARAEAGESTLLIAPTGAGKTLAGFL
PSLTDLTRRGKIPPGSAFTGIHTLYISPLKALAVDIERNLMKPVTEMGLPVSVENRTGDT
PSGKRQRQKLNPPDILLTTPEQVALLLANREAERFFKDLKYIILDELHSLVTSKRGHMLS
LGLARIRKLAPHVQSIGLSATVAEPMDLQKWLVAQEEGVERHAGLVMVEGGAKPDISILA
TDERIPWSGHSAKYAIPDIYRELKEHRTTLLFVNTRSQAEMLFQELWSANDDNLPIALHH
GSLDVGQRRKVEAAMAANRLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRA
NHRMDEPSKAILVPANRFEVMECQAALDANYVGAQDTPPVGAGALDVLAQHILGMACAEP
FDMLELYDEVRSASPYADLSWETFERIVDFVATGGYALRTYERYARIRKTPEGRWRVSNP
QVAQQYRLNLGTIVEEAMLNIRMVKRNALGSLGRGGASLGKVEEYFLEQLSPGDTFLFSG
KVLRFEGIRENECLASQTFSMDPKIPSYAGGKFPLSTYLADQVRSMIADPDRRRKLPDQV
RDWLEIQKEKSMLPKRDELLIETFPRGSRAYMVAYPFEGRLAHQTLGMLLTRRLERAGAR
PMGFVATDYSLGIWGLEDLGVMIANGHLSLSDLFDEDMLGDDLEMWLDESFLLKRTFRNC
AVIAGLIERRHPGKEKTGRQVTVSADLIYDVLRSHEPDHILMQATRQDAATGLLDIGRLG
DMLKRIKGHITHRALDHISPLAVPVMLEIGKVPVPGEAHDVLLAEAADDLIREAME
NT seq 2511 nt   +upstreamnt  +downstreamnt
gtggaccagatcgattccgagagccgtcttgccttacccgcccccttcatccgctggttc
gcggaaaagggctggcagccacgcgcgcatcagttggagttactggcccgcgccgaggcc
ggagaaagtaccttgctgatcgcgccgaccggggccggcaagacgctggccggttttctg
ccgtcgctcaccgatctgacacgccggggcaagatcccgccaggttccgcttttaccggc
attcacacgctctacatctcgccgctgaaggcgctggccgtcgatatcgagcgcaatctg
atgaagccggtcacggaaatgggcctgccggtctccgttgaaaaccgcaccggcgatacg
ccgagcggcaagcgccagcgccagaagctcaatccgcctgacattctgctgacgacgccg
gagcaggtggcgctgctgcttgccaatcgcgaggcggagcgcttcttcaaggacctgaaa
tacatcatcctcgacgagttgcattcgctggtgacgtcgaagcgcggccacatgctgtcg
ctgggtctcgcccgcatccgcaagcttgcgccgcatgtgcagagcatcggtctttccgct
accgtcgccgagccgatggacttgcagaagtggctggtggcgcaggaagagggggtggag
cggcatgccgggctggtgatggtcgagggcggcgccaagcctgatatttcgatccttgcg
accgacgaacgcatcccctggtccggccattccgccaaatacgccatccccgatatctat
cgcgagttgaaggagcatcgaacgacgctgctcttcgtcaacacgcgctcgcaggcggaa
atgctgtttcaggagctttggtcggccaatgacgacaatctgccgatcgcgctgcatcac
ggctcgctcgatgtcggccagcgccgcaaggtcgaggccgccatggccgccaacaggctg
cgcgccgtcgtcgccacctcgacgctcgatctcggcatcgactggggcgatgtcgatctc
gtcatccatgtcggcgcgccgaagggtgcaagccgccttgcccagcgcatcggccgcgcc
aatcatcgcatggacgagccgtcgaaggcgatcctggtgccggccaaccgttttgaggtg
atggaatgccaggcggccctcgacgccaattatgtcggcgcgcaggatacgccgccggtc
ggtgccggcgcgctcgatgtcctggcccagcatattctcggcatggcctgcgccgagcct
ttcgacatgctggaactctatgacgaggttcgcagcgcctcaccctatgccgatctttcc
tgggagaccttcgagcgtatcgtcgatttcgtcgccaccggcggctatgcgctacgcacc
tacgagcgctatgcccgcatccgcaagacgccggagggtcgctggcgggtctcgaatcca
caggtggcgcagcaataccggctgaacctcggcactattgtcgaagaagcgatgctgaat
atccgcatggtgaagcgcaatgcgctgggttcgctcggtcgaggtggggcctcgctcggc
aaggtcgaggagtattttctcgaacagctatcgcccggcgacacgtttctgttttccggc
aaggtgctgcgtttcgaaggcatccgcgagaatgaatgcctggcctcgcagaccttctcc
atggacccgaaaatcccgtcctacgccggcggcaagtttccgctgtcgacctatctcgcc
gatcaggtgcgctcgatgatcgccgatccagatcgccgtcgcaaactgccggatcaggtt
cgcgactggctagaaattcaaaaagagaagtcgatgctgccgaagcgcgacgagttgctg
atcgagacctttccgcgcggtagccgcgcctacatggtggcctatcctttcgaaggacgg
ctggcgcaccagacgctcggcatgttgctgacgcggaggctggagcgggcaggggcaaga
ccgatgggtttcgttgccaccgattattcactcggcatctgggggctggaggacctaggg
gtgatgattgccaacggccatctcagcctgtccgatctcttcgacgaggacatgcttggc
gatgatcttgagatgtggctcgatgaatccttcctgctgaagcgcaccttccgcaattgc
gccgtgattgccggcttgatcgagcgccgccatcccggcaaggaaaagaccggccggcag
gtgacggtgtccgccgatttgatctatgacgtgctacgcagccatgagcccgaccatatc
ctgatgcaggcgacacggcaggatgcggccacgggacttttggatatcggccgtcttggg
gatatgctgaagcgaatcaagggccacatcacccaccgggcgctggatcacatctcgccg
ctcgccgtgccggtgatgctggaaatcggcaaggtgccggtgccgggcgaggcgcatgat
gtcctgctggccgaagcggcggatgatctgatccgcgaggccatggaatga

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