Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0480
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Entry
Rmag_0480 CDS
T00438
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rmag_0480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rma03019
]
Rmag_0480
Enzymes [BR:
rma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Rmag_0480
Messenger RNA biogenesis [BR:
rma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Rmag_0480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ABL02236
UniProt:
A1AWC9
LinkDB
All DBs
Position
528545..529684
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AA seq
379 aa
AA seq
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MKAIHQSIKFDKKLLDKDALRVINVINKAGFKAYLVGGCVRDLLLNLKPKDFDIATNAKP
EQVHKLFKRSRLIGRRFRLVHVVFSARKFIEVATFRSGKVQTAKNGVVIRDNCYGNIEDD
VVRRDFNINALYYDIKTQEIIDYVGGLEDIKAKEMHIIGNPGIRFEQDPVRMIRAIRFQT
KLEFQLSYEIKSAIFEQASLLGNISTVRLYEECIKLFHNEYGFEVYERLEKYGLLKYLFK
QTHKNEFIKKALLNTSDRIKKNQSVTPVFLFAVFLWRAYNERFIALKKKQSCSSLAMKQA
SEEVIINQIKQVSLPRWLSAIIKDIWLMQSRLEKMQPKKVKVLLSNPRFRMAYDFLLLRS
MSINPELVEAAKFWTKAQQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctattcatcaaagtattaagtttgataaaaaacttctagacaaagacgcttta
agggttattaatgttattaataaagcaggatttaaagcctatctagtaggtggctgtgtt
agagatttactcttaaatttaaagccaaaagattttgatattgcaactaatgctaagcca
gaacaagtgcataaattatttaaacgctcacgtttaattggtaggcgatttcgtttagta
cacgttgtgttttcagcacgtaaatttattgaagtggctacttttaggtcgggtaaggtg
caaaccgctaaaaacggtgttgttattcgtgataattgctatggtaatattgaagacgat
gttgtgcgtagggactttaatattaacgcgctttattatgatattaaaacacaagaaatt
attgattatgtgggcggacttgaggatataaaagcgaaagaaatgcatattattggcaat
ccaggtataaggtttgagcaagatccagtgcgcatgattagagctattaggtttcaaact
aaattagagttccaattgagttatgaaattaagtcggctatttttgaacaagcatcactt
cttggtaatatttctacagtgcgtttgtatgaagagtgtattaaattgtttcataatgag
tatgggtttgaagtgtatgagcgcttagaaaaatatggtttattaaaatatttatttaaa
caaactcataagaatgaatttatcaaaaaggccttgttaaacacatcggatagaattaaa
aaaaatcaatctgtcacgcctgtatttttatttgctgtatttttatggcgggcctataat
gagcgttttattgcgcttaaaaagaaacaaagttgctcgtctttagcaatgaaacaggct
tctgaggaggtgattattaatcaaattaaacaagtttcgttacccaggtggttaagtgct
ataattaaggatatttggctaatgcaatcaagattggaaaaaatgcaaccaaaaaaagtc
aaagtattactaagcaatccacgttttagaatggcatacgattttttattattacgctct
atgagcattaacccagaattagttgaagcggctaaattttggaccaaagcccaacagtga
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