Rickettsia massiliae AZT80: RMB_03945
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Entry
RMB_03945 CDS
T01758
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rmi
Rickettsia massiliae AZT80
Pathway
rmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RMB_03945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmi03400
]
RMB_03945
Enzymes [BR:
rmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RMB_03945
DNA repair and recombination proteins [BR:
rmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RMB_03945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
PriA_CRR
Helicase_C
AAA_30
nSTAND3
UvrD-helicase
AAA_11
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AFB31596
UniProt:
H6QIU6
LinkDB
All DBs
Position
694625..696571
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AA seq
648 aa
AA seq
DB search
MRIAKILLPVTKLFPLDYLIPEDLELNIGDLVVVPFRNKELTGIVWKLVSNSEAKKIKTI
RAKVPLNLNITSEVLELIKWMSSYYMSELGSIAKLVLPIDIAEKPIKVQEQKVNNNVVLP
DLSEEQKQAVTILNESNKPTLVKGVTGSGKTEIYFHLIADYLAKGKQVLVMLPEIALSTQ
IINRFIERFGFEPIMWNSSVTKAHKKMILRGILSDKVKVVIGARSSLFLPFKNLGLIVID
EEHDDSYKQDDGILYNARDTAIVRGTFDKAQIVLCSATPSIETIHNIEMDKYQLVTLVNR
YKNVDVPNIEIIDMTKEKLSKNSYLSKLLIEAIKGNLDNKKQVLLFLNRRGYAPLMLCKA
CGHRFTCKFCSSWMVVHKATKKLECHHCGYQSKIFSSCPECLEDETLTICGPGIERIEEE
AKALFPESKIAVISKDHAKSPEKIAQLLHQMENLEIDILIGTQIITKGYHFPNLTLVGVI
DADLGSNNADLRASERTFQLLHQVGGRAGRGDSKGVVYLQSYYPDNTIFSYVKAGDEDSF
FANELEIRKSANMPPFSKTASVILSGSSEAKILEIARDMVRIAPKANVKILGPASSLMSK
LAGKYRYRILIIADKKFSLQQYLKFWLSLIKIPSFCHLKIDIDPKSFY
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatagcaaaaatattattaccggtaacaaaattatttccgctagattatttaata
cctgaagatttagagctaaacataggtgatcttgttgtagtgccttttagaaataaggaa
ttaaccggcatagtatggaagcttgtttcaaattccgaggcaaaaaaaataaaaactatt
agagcgaaagtaccattaaatttaaatattacttcagaagttttagaattaattaaatgg
atgagtagctactatatgtcagagcttgggagcatagccaagttagtattacctatagat
attgctgaaaaaccgattaaagttcaagagcagaaagtcaataataacgttgtgctacct
gatttatcagaagagcagaaacaagcagtaacaattttaaatgaaagtaataagccaaca
cttgttaaaggtgttacgggatcaggtaaaacagaaatatattttcatctaatagcagat
tacttagcaaaaggcaaacaagtgcttgttatgttgcctgaaattgctttaagtacacaa
attattaatcgttttatagagcgattcggttttgagcctatcatgtggaactcaagcgtt
accaaagctcataagaaaatgattttaagaggtatattaagcgataaagttaaagtagta
attggggctagaagtagtttgtttttaccttttaaaaatctcggtttaatagttatagat
gaggagcatgacgattcctataaacaagatgacggtatattatataatgctagggatacg
gctatcgtaagaggtacatttgataaagcacaaattgttttgtgttcggcaacaccgtct
attgaaacgatacataatatagaaatggataaatatcaattggttacattggttaataga
tacaaaaatgtcgatgtgccaaatatagaaataatcgacatgactaaagaaaagctatct
aagaattcctatttatccaagcttcttatagaagctatcaaaggtaatttagataataaa
aagcaagtcttattatttcttaataggcgtggttatgctccgctcatgctatgcaaagct
tgcggtcacagatttacctgtaaattctgctcttcttggatggtagtacataaagcgact
aaaaaacttgaatgtcaccattgcggttatcaaagtaaaatttttagttcttgtcctgaa
tgtctagaggatgaaacattaactatctgtggtccaggtatagagagaatagaggaagaa
gcaaaagcactttttcctgagagtaaaattgcggtgataagtaaagatcatgctaaaagc
ccagaaaaaatagcacagcttctacatcaaatggaaaatttagaaattgatattttaata
ggtacacaaataataacaaaaggttatcactttccgaatcttactttagttggagtaata
gatgccgatcttggaagcaataatgccgatcttagagcatctgagcgaacttttcagcta
ctacatcaagtaggtggtagagcgggtagaggagatagtaaaggtgtagtatatttacaa
agctattatcctgataatacaatttttagttatgttaaagccggtgatgaagatagtttt
tttgcaaatgaacttgaaataagaaaatcagcaaatatgccgccattttccaaaacagca
tcggtaattttatcaggttccagtgaggctaaaattctagaaattgctagggatatggtc
cgaattgcaccaaaagcaaacgtgaaaattttaggaccagcaagctcattaatgtcaaag
ctcgctggtaaatatcgttaccgaatacttattatagccgataagaaatttagtttgcag
caatatttaaaattttggctaagccttataaaaattccttctttttgccatctaaaaata
gatatcgatcctaaaagtttttattag
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