Roseomonas marmotae: IAI58_08645
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Entry
IAI58_08645 CDS
T08030
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rmt
Roseomonas marmotae
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmt03021
]
IAI58_08645 (rpoH)
Transcription machinery [BR:
rmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IAI58_08645 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
HTH_11
HTH_25
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QTI77823
LinkDB
All DBs
Position
complement(1831032..1831922)
Genome browser
AA seq
296 aa
AA seq
DB search
MASTTSSMIPIAPEGNLSRYLQEIRKFPMLTPEEEFRLAKAWKDAGDQKAAHRLVTSHLR
LVAKIAMGYRGYGLPVGELISEGNVGMMQAVRRFDPDRGFRLATYAMWWIRAAIQEYILH
SWSLVKMGTTAAQKKLFFNLRRLKGQMAALEEGDLQPEQVQKIAHVLQVPEQDVVSMNRR
LASPDNSLNAPVRADSEGEWQDWLVDESESQETEIAERQDMSNRRELLGEALKTLNERER
HILIERRLKDEPTTLEELSQQYNISRERVRQIEVRAFEKLQKSMKAQIAERRLTVD
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcttccactacgtcttcgatgatcccgattgccccggagggcaatctctcccgctac
ctgcaggagattcgtaaattccccatgttgacgccggaggaggagttccggcttgccaag
gcatggaaggatgccggcgaccagaaggccgcccaccgccttgttacatctcacctgcgc
ctcgttgccaagatcgccatgggctaccgcggctacggcctgccggtgggcgagctgatc
agcgagggcaatgtcggcatgatgcaggcagtgcgccgctttgatcccgaccggggcttc
cgcctggccacatacgccatgtggtggatccgcgccgcgatccaagagtacattctgcat
tcctggtccctggtaaagatgggcaccacggcggcgcagaagaagctgttcttcaacctg
cgccggctgaagggccagatggccgccctcgaggagggcgacctgcagcctgagcaggtg
caaaagatcgcccatgtgctgcaggtgccggaacaggacgtcgtgtccatgaaccgtcgc
ctcgcctcgcccgacaattcgctgaacgcgcctgttcgcgccgacagcgagggtgagtgg
caggactggctggtggatgagagcgagagccaggaaaccgagatcgccgagcggcaggac
atgtccaaccgccgtgagctgctcggtgaggcgctaaagacgctcaatgagcgtgagcgc
cacatcctgatcgagcgccgcctgaaggacgagccgacgacgctggaggaactctcccag
cagtacaacatcagccgcgagcgtgtgcggcagatcgaggtccgcgccttcgagaagctc
cagaagagcatgaaggcgcagatcgccgagcgccggctgacggtggactga
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