Rattus norvegicus (rat): 25273
Help
Entry
25273 CDS
T01003
Gene name
Smo, Smoh
Definition
(RefSeq) smoothened, frizzled class receptor
KO
K06226
smoothened
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04340
Hedgehog signaling pathway
rno04360
Axon guidance
rno05200
Pathways in cancer
rno05205
Proteoglycans in cancer
rno05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
25273 (Smo)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
25273 (Smo)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
25273 (Smo)
05205 Proteoglycans in cancer
25273 (Smo)
09162 Cancer: specific types
05217 Basal cell carcinoma
25273 (Smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rno04030
]
25273 (Smo)
G protein-coupled receptors [BR:
rno04030
]
Frizzled / Smoothened family
25273 (Smo)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
25273
NCBI-ProteinID:
NP_036939
RGD:
3726
Ensembl:
ENSRNOG00000008332
UniProt:
P97698
LinkDB
All DBs
Position
4q22
AA seq
793 aa
AA seq
DB search
MAAGRPVRGPELAPRRLLQLLLLVLLGGRGRGAALSGNVTGPGPRSAGGSARRNAPVTSP
PPPLLSHCGRAAHCEPLRYNVCLGSALPYGATTTLLAGDSDSQEEAHSKLVLWSGLRNAP
RCWAVIQPLLCAVYMPKCENDRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDHFPE
GCPNEVQNIKFNSSGQCEAPLVRTDNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAA
FGAVTGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCR
ADGTMRFGEPTSSETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGK
TSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGG
YFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFN
QAEWERSFRDYVLCQANVTIGLPTKKPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWV
WTKATLLIWRRTWCRLTGHSDDEPKRIKKSKMIAKAFSKRRELLQNPGQELSFSMHTVSH
DGPVAGLAFELNEPSADVSSAWAQHVTKMVARRGAILPQDVSVTPVATPVPPEEQANLWL
VEAEISPELEKRLGRKKKRRKRKKEVCPLGPAPELHHSAPVPATSAVPRLPQLPRQKCLV
AANAWGTGEPCRQGAWTVVSNPFCPEPSPHQDPFLPGASAPRVWAQGRLQGLGSIHSRTN
LMEAELLDADSDF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggccgccccgtgcgtgggcccgagctggcgccccggaggctgctgcagttg
ctgctgctggtactgcttgggggccggggccggggggcggccttgagcgggaacgtgacc
gggcctgggcctcgcagtgccggcgggagcgcgaggaggaacgcgccggtgaccagccct
ccgccgccgctgctgagccactgcggccgggccgcccactgcgagcctttgcgctacaac
gtgtgcctgggctccgcgctgccctacggagccaccaccacgctgctggctggggactcg
gactcgcaggaggaagcgcacagcaagctcgtgctctggtccggcctccggaatgctccc
cgatgctgggcagtgatccagcccctgctgtgtgctgtctacatgcccaagtgtgaaaat
gaccgagtggagttgcccagccgtaccctctgccaggccacccgaggcccctgtgccatt
gtggagcgggaacgagggtggcctgactttctgcgttgcacgccggaccacttccctgaa
ggctgtccaaacgaggtacaaaacatcaagttcaacagttcaggccaatgtgaagcaccc
ttggtgaggacagacaaccccaagagctggtacgaggacgtggagggctgtgggatccag
tgccagaacccgctgttcaccgaggctgagcaccaggacatgcacagttacatcgcagcc
ttcggggcggtcaccggcctctgtacactcttcaccctggccacctttgtggctgactgg
cggaactccaatcgctaccctgcggttattctcttctatgtcaatgcgtgtttctttgtg
ggcagcattggctggctggcccagttcatggatggtgcccgccgggagattgtttgccga
gcagatggcaccatgagatttggggagcccacctccagcgagaccctatcctgtgtcatc
atctttgtcatcgtgtactatgccttgatggctggagtagtgtggttcgtggtcctcacc
tatgcctggcacacctccttcaaagccctgggcaccacttaccagcctctctcgggcaag
acatcctatttccacctgctcacgtggtcactccccttcgtcctcactgtggcaatcctt
gctgtggctcaggtagatggggactccgtgagtggcatctgctttgtaggctacaagaac
tatcggtaccgtgctggctttgtacttgccccaattggcctggtgcttattgtgggaggc
tacttcctcatccgaggggtcatgactctgttctccatcaagagcaaccaccctgggctt
ctgagtgagaaggcagccagcaagatcaatgagaccatgctgcgcctgggcatttttggc
ttcctcgcctttggcttcgtgctcatcaccttcagctgccacttctatgacttcttcaac
caggctgagtgggagcgtagcttccgggactatgtgctatgccaagccaatgtgaccatt
gggctgcctaccaagaagcccattcctgattgtgagatcaagaatcggcccagcctcctg
gtggagaagatcaatctgtttgccatgtttggcactggcattgccatgagcacctgggtc
tggaccaaggccaccctgctcatctggaggcgcacctggtgcaggttgactgggcacagt
gatgatgaacccaagagaatcaagaaaagcaagatgattgccaaggccttctctaagcgg
cgtgaactgctgcagaacccgggccaggagctctccttcagcatgcacactgtctcccat
gatggacctgttgccggtttggcttttgaactcaatgaaccctcagctgatgtctcctct
gcctgggcccagcacgtcaccaagatggtggctcgaagaggagccatattaccccaggat
gtgtctgtcacccctgtggcaactccagtgccaccagaagaacaagccaacctgtggctg
gttgaggcagagatctccccagagttagagaagcgtttaggccggaagaagaagcggagg
aagaggaagaaggaggtgtgccccttggggccagcccctgaacttcaccactctgcccct
gttcctgccaccagtgcagttcctcggctgcctcagctgcctcggcagaagtgcctagta
gctgcaaatgcctggggaacaggagagccctgccgacagggagcctggactgtagtctcc
aaccccttctgcccagagcctagtccccatcaagatccatttctccctggtgcctcagcc
cccagggtctgggctcagggccgcctccaggggctgggatccattcattcccgcactaac
ctaatggaggctgagctcttggatgcagactcggacttctga
DBGET
integrated database retrieval system
