Rattus norvegicus (rat): 292541
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Entry
292541 CDS
T01003
Symbol
Nlrp12
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12
KO
K20865
NACHT, LRR and PYD domains-containing protein 12
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
292541 (Nlrp12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rno04054
]
292541 (Nlrp12)
Pattern recognition receptors [BR:
rno04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
292541 (Nlrp12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
PYRIN
LRR_6
NOD2_WH
FISNA
AAA_16
AAA_25
NB-ARC
Motif
Other DBs
NCBI-GeneID:
292541
NCBI-ProteinID:
NP_001162613
RGD:
1309415
Ensembl:
ENSRNOG00000060745
UniProt:
A0A0G2JW23
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All DBs
Position
1:74848020..74885945
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AA seq
1054 aa
AA seq
DB search
MLPATAKDALHRLSTYLEELEAGELKKFKLYLGIAEELGQDKIPRGRMEMAGPLEMAQLM
VAHMGTKEAWLLALSTFERIHRKDLWERGQGEDLVRVTPSNGLCSLESQSTCLSDVSPDA
PRKDPQITYKDYVRRKFRLMEDRNARLGECVNLSHRYTRLLLVKEHSNPIWAQQKLLETG
WEHSRTRGHQASPIQMETLFEPDEERPEPPRTVVLQGAAGMGKSMLTHKVMLDWADGRLF
QDQFDYVFYISCRELNRSHTQCSVHDLLSSCWPEHGAPLEDLIRAPDRLLFIIDGFHELH
PSFHDVQGPWCHCWEEKRPTELLLGSLIRRLLLPQLSLLITTRPCALEKLHGLLEHPRHV
EILGFSEAEREEYFYRYFHNTGQASQVFSFMRDYEPLFTMCFVPMVSWVVCTCLKQQLES
GELLRQTSRTTTAVYMFYLLSLMQPKPGTPTFKVPANQRGLVSLAAEGLWNQKILFEEED
LGKHGLDGAEVSTFLNVNIFQKGIKCEKFYSFIHLSFQEFFTAMYCALHGREAVRRALAE
YGFSERNFLAHTVRFLFGLLNEEMRCYLERNLGWTISPQVKEEALAWIQNKARSEGSTLQ
HGSLELLSCLYEIQEEDFIQQALSHFQVVVVRNLSTKMEHVVCSFCARYCRGTEVLHLYG
SAYSTGAEDGPPEPPGAQTQSTHSQERNILPDIYSAYLSATICTNSNLIELALYRNALGS
QGVRLLCQGLRHANCKLQNLRLKRCHISGSACQDLAAAIIANRNLIRLDLSGNSIGVLGL
ELLCEGLQHPMCRLQMIQLRKCLLEAAAGRALASVLSNNSHLVELDLTGNPLEDLGLKLL
CQGLRHPVCRLRTLWLKICHLGQASCEDLASTLKMNQSLMELDLGLNDLGDSGALLLCEG
LRHPDCKLQTLRLGICRLGSDACAGVASVLQVNTCLRELDLSFNDLGDRGLWLLGEGLRH
QTCRLQKLWLDSCGLTSKACEDLSSVLGISQTLNELYLTNNALGDTGVRLLCKRLRHPGC
KLRVLWLFGMDLNKVTHRRMAALRVTKPYLDIGC
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgttgccagctacagccaaggatgccctccatcgactgtccacctacctggaagaactt
gaggctggggaactgaagaaattcaaattatacctggggattgcggaggaactgggccag
gacaagatccccaggggacgaatggagatggctggtcctctggaaatggcccaattgatg
gtggcccatatggggacaaaggaggcttggcttctggctctcagcacctttgagaggatc
cacaggaaggacctgtgggagcgaggacagggagaagacctggtgagggtgactccaagt
aatggtctatgctctcttgagagccagtcaacgtgcctttcggacgtctctcctgatgct
ccaagaaaagatccccagataacctacaaagactatgtccgaaggaaattccggctaatg
gaagaccgcaatgcgcgactaggcgaatgtgtgaacttaagtcatcgttacactcggctt
ctcctagtaaaggaacactcaaatcctatctgggcacagcaaaaacttctggaaacaggg
tgggaacactccagaaccaggggccaccaggctagccctatccaaatggagaccctcttt
gagccagatgaagaacgcccggagccaccacgcacagtggtattacaaggggcagcgggg
atggggaagtccatgttgacccacaaagtgatgttggactgggccgatgggagactcttc
caagaccagttcgattatgtcttctatatcagctgcagggagttgaatagaagccacacc
cagtgcagtgtacatgacctcctctccagctgctggccagagcatggtgcacccctcgag
gacctcatccgggctcctgatcgtcttctattcatcatcgatggcttccatgagcttcat
ccctctttccatgacgttcagggtccctggtgccactgctgggaggagaaacgacccacg
gaactcctcctcggaagcctgattcggaggttgcttctgccccagctctctttgctcatc
accacacgaccctgtgcactggagaagctgcacggcttgttggaacaccctaggcacgtg
gagatcctgggcttctccgaggcagagagggaggaatatttctacagatatttccacaac
actggacaagcgagccaagtgttcagcttcatgagggactatgagcccctctttaccatg
tgttttgttcccatggtgtcctgggtggtctgcacctgcttaaagcagcagctagaaagt
ggggagcttttaagacaaacatctaggaccaccacagcggtttatatgttctaccttctg
agcctgatgcagcccaagccagggaccccaaccttcaaagtcccagccaaccagagaggc
ctggtctctctggctgcagagggcctctggaatcagaagattctcttcgaggaagaggat
cttgggaaacatggcctagatggagcagaggtctccaccttcctcaacgtgaacatattc
cagaagggcatcaagtgtgagaaattctacagcttcatccacctgagtttccaggaattc
ttcacagccatgtactgtgcactgcacggcagagaggcggtgaggagagcactggctgag
tatggtttctcagaaaggaacttcttggcccacaccgtccgctttctctttggcctcctc
aatgaagagatgagatgctacctcgagaggaatctcggctggaccatctcccctcaggtc
aaggaggaagcattggcgtggatccaaaacaaggctcgaagtgagggctccaccctgcag
catggctccctggagcttctcagctgcttgtacgagatccaggaggaagacttcatccag
caggccctgagccactttcaggtggttgttgtcagaaacctctcaacgaagatggagcac
gtggtctgctcgttttgtgcgaggtactgcagaggcacagaagtgcttcacttgtatggg
agtgcctatagtacaggcgcagaggatggcccgccagaacctccaggagcccagacgcag
tccacacactcacaggaaaggaacatccttcctgacatttacagtgcatacctctcagca
accatctgcaccaactcaaacctgatcgagctggccttgtatcgaaacgccttgggcagc
cagggcgtgaggctgctctgtcaaggcctccgacatgcaaactgcaagcttcagaacctg
aggctgaagaggtgtcacatctccggatcagcctgccaggatctcgcagcggctatcatc
gccaataggaatttaatcaggctggacctcagtggcaacagcattggagtgctaggccta
gagctgctctgtgaggggttacagcaccccatgtgtaggctgcagatgatccagctgagg
aagtgtttgctggaggctgcggctggccgagcactggcctctgttctcagcaacaactca
catcttgtagaactggatctgacaggaaaccccttggaggatttggggctgaagttactg
tgtcaagggctgaggcacccagtctgcaggctgcggaccttgtggctgaagatctgccac
cttggacaagcttcctgtgaagatctggcttctactctcaaaatgaaccagagcctgatg
gagctggacctgggtctgaatgaccttggggattctggggcgcttctgctgtgtgagggc
ctcaggcatccagattgcaaactccagaccctccggctgggcatttgccgactgggctca
gacgcgtgtgcaggggttgctagtgtgctccaggtcaacacgtgcctccgagagctggac
ctgagcttcaatgacttgggagacaggggcctgtggctgctgggggaaggactgaggcac
cagacctgcagactccagaagctctggctggacagttgcggcctcacttccaaagcatgt
gaggacctgtcttcagtcctgggaatcagtcagaccctgaatgagctttatctgaccaat
aatgctctgggggacactggtgttcgtctgctgtgcaagaggctgaggcatccggggtgc
aagcttcgtgtcctgtggcttttcggaatggacctgaacaaagtgacccacaggaggatg
gcggcacttcgagtcacaaaaccatacctagatattgggtgctaa
DBGET
integrated database retrieval system