Rattus norvegicus (rat): 499702
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Entry
499702 CDS
T01003
Symbol
Synpo2
Name
(RefSeq) synaptopodin-2
KO
K24066
synaptopodin-2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
499702 (Synpo2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
499702 (Synpo2)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
499702 (Synpo2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
499702
NCBI-ProteinID:
NP_001178892
RGD:
1564779
Ensembl:
ENSRNOG00000014867
UniProt:
D4A702
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All DBs
Position
2:complement(213901685..214055844)
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AA seq
1262 aa
AA seq
DB search
MGTGDFICISMTGGAPWGFRLQGGKEEKQPLQVAKIRSQSKASDSGLCVGDEVVSINGNP
CADLTYPEVIKLMESITDSLHLLIKRPTSGTSEALDSETENTNHQHLPHGGPMESTTLQI
QHAAKTQGKDFLLASVQTSAPRTEDQGNAWGYAECTTEDQVSQMPGSQEGHLVEEVILRK
KPEAGQPGHVVELQLSLSKERQRCTSDPIVTLLGNEKFKSPDPDWGTQHGRTVHINSIPA
PEKADTSLTSGTTVQTSSGRELTVIQGRDPGGTGLPQVEVILDCSDRLKAEECRLQAGRG
CVASPVEGGRSEAPPSLVSFAVSSEGTEQGEDQRSGKDQGRPHKHRARHARLRRSESLSE
KQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELEREEEEEDQ
EAGDKDEISDLAFLGTSESEVDEELLSDVDDNTQVVNFDWDSGLVDIEKRLNRGDKMEML
PDTTGKGALMFAKRRERMEQFTAQNEEEKTGGLAGGGSDALQTDGLRTMTSYQRKEESVR
MQSSVSESSFQMGRSLGSVPQQNGFSGVSETAGPQRMIPMNRTAKPFLGSVNQTAAPFSP
TQSVTSPIPDFPAPPPYSAVSPPPEAFSRGISSPVAGPAQPPPWPQPAPWSQPAFYDSSE
QIASRDERIAVPAKRTGILQEAKRRGTTKPMFTFKETKVSPNPELLSLLQNAEGKRGTGA
GGDSGPEEDYLSLGAEACNFMQSSAKQKTPPPVAPKPAVKTSSSSQPVAPVSPVWSPGVA
PAQGPAFSTTNPPNPPQVTAVSSIKIAQPTCPPARPASALNLAGPFKGPQAAVVSHNYTP
KPSAPTPLVNAAPAGAGGPSNELPGMSGKGAQLFAKRQSRMEKYVVDSDTVQAHTVRAQS
PTPSLPASWKYSSNVRAPPPVAYNPIHSPSYPLAAIKSQPPGAQASKTSKKKGKKPLNTL
DVMKHQPYQLNASLFTFQPPDSKDGLPQKSTVKVSSVAPAMKQALPPRQADIGSPTNAKA
SSVYSVPAYTSQPNFFAEATSPVSASPVPVSVPTSPKQETTSTSYFVAPRPKFSAKKSGV
TVQENWRSLSLPGRAAPPIMSAPPWLCQPAYSYSSKPTLEQEKANKRPTPWEAAAKSPLG
LVDEAFRPRNIEESIVANVVSAARRKVFAGSQEDWKERLSFVPQTQKTSMSFSERREYNV
PSPVNSHVSSHSLYSSQLPYVCYRKESRNDLKAMSMDTRSEYCLPLGGYDYNPHPRGWRH
QP
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccggagatttcatctgcatttccatgactggaggggcgccctgggggttcagg
ctgcaaggaggcaaggaggagaagcagcccttgcaagtggcaaagattcgaagtcagagc
aaggcatcggactccgggctgtgtgttggggatgaagtggtgtccatcaatggtaaccct
tgtgcagaccttacttaccctgaagtcatcaaactcatggaaagcataacggactccctc
catctgcttattaaaagacccaccagtggaacaagtgaggctttggattctgaaacagaa
aatacaaaccaccagcaccttccacacggggggcccatggaaagtaccaccctgcagatc
cagcacgctgccaagacccagggcaaagacttccttcttgcttcagtccagactagtgct
ccccgaactgaggaccaaggaaatgcctggggttatgcagagtgtacaacagaagaccaa
gtttcccagatgcctggctcccaagaaggacacttggtagaagaggtcatcttaaggaaa
aagccagaagcaggccagccaggccatgtggttgagttacagctgtccctctcaaaggaa
agacagcgatgcaccagtgaccctatagtgactctcctgggaaatgaaaaattcaagtct
ccagacccagactggggcacccaacacgggaggactgtccacataaattcaatccctgct
cctgagaaagcagacacttctctgacgtccggcaccacagtccagacctccagtggccgg
gagctgacagtgatccagggaagagacccaggaggcacagggctgccccaggtggaagtg
attctagattgctctgacaggctgaaggctgaagagtgcaggctgcaggcaggaaggggg
tgtgtggcttctcccgtggaaggagggcggtcagaagcacctccttctctggtctccttt
gcggtctcatcagaaggcaccgagcagggagaagatcaacgctcgggaaaggaccagggc
agaccacacaagcacagagcgaggcatgcccggctcaggaggagtgaaagtctgtctgaa
aagcaagtaaaagaagccaagtctaaatgcaaaagcatcgccctcctcctaacggatgct
cccaacccgaactccaagggggtgttgatgtttaagaagcggaggcggagagcccggaag
tacaccctagtcagttacggtactggagagcttgagcgagaggaggaagaggaggaccag
gaagcaggtgacaaggacgagataagtgaccttgcatttcttggaaccagcgagtcggaa
gtggatgaagagttactgtctgacgtggacgacaacacccaagttgtgaacttcgattgg
gattctggactggtggacattgaaaagaggctgaaccgaggcgacaagatggagatgttg
cccgacaccacaggcaagggagcgctcatgtttgccaagaggagagagaggatggaacag
ttcacagcccaaaatgaagaggaaaagaccggtgggctagcaggcggaggatcagatgcc
ctacagacggacggtctgagaaccatgacttcttatcaaagaaaagaagaatcggtgaga
atgcagagctctgtgagtgagagctccttccagatgggacgcagtcttggcagtgtgcca
caacagaatggcttcagtggagtgtctgagacagcagggccccagaggatgatccccatg
aacagaaccgccaagcccttcctgggatctgtgaaccagacagcggccccattctcccca
acacagagtgtgacaagtcccatccctgacttccctgcgccaccaccatactctgcagtc
tcacctccaccagaagccttctccagggggatatcaagcccagttgctggcccggcacag
ccccctccgtggccccagcctgctccatggtcgcaaccagccttctatgattcttctgag
caaatagcttcccgcgatgagaggatcgcagtgccggccaaaagaacaggaatactgcag
gaagccaaaagacgaggcacaacaaaacccatgtttactttcaaagaaaccaaagtgagc
cccaaccccgaactcctgtcccttcttcaaaatgcagaaggcaagcgaggcactggagct
ggaggggactccgggccagaagaagactacctcagtttaggcgcagaggcttgtaatttc
atgcagagttctgccaaacaaaagacccctcctcccgtcgctccaaagcctgcagtcaag
acctcctcttcctcccaaccagtagcccctgtttctccagtctggtctccaggagtggct
ccagcccagggtcctgccttctctacaacaaacccaccaaacccaccacaggtcactgct
gtgtcctccatcaaaatagcccagcctacctgccctccagcccggcccgcgagtgcactg
aacctggctggtcctttcaaaggtccccaagcagcagtagtcagtcataactatacaccc
aagccatcagcacccacaccattagtaaatgctgctcctgctggtgccgggggaccatcc
aatgagcttcctggaatgagtgggaaaggagcccaactcttcgctaaaaggcagtctagg
atggagaagtatgtggtagattctgacacggtgcaggcccacacagttcgggcccagtct
cctactccatccctgcccgccagttggaagtactcctccaatgtccgagcaccgcctccg
gtggcctacaatcctatccattccccgtcttacccactggctgctatcaagtctcagcca
ccgggagcccaggcctccaaaacgagcaagaaaaagggcaagaaacctcttaacactttg
gatgtcatgaagcaccaaccatatcagctcaacgcgtctttgtttacttttcaacccccc
gattcaaaggatggcctccctcaaaagtcaacagtcaaggtcagttcagtagcccctgcc
atgaagcaagcccttcctccccggcaggcggatattggctctcccacaaacgcgaaggct
tcatctgtgtattcagtcccggcctatacctctcagcccaacttctttgcggaggccacc
tcaccagtcagcgcatccccggtgcctgtgagtgttcccacctctccaaagcaagaaacg
acctccacatcctattttgtggctccgaggccgaagttctcagccaagaaaagtggtgtc
acagttcaggagaactggcgctccctttctctccccggaagagcagctccgcccatcatg
tctgcacctccctggctgtgccagcctgcctacagttactccagcaaaccaaccctcgag
caagagaaagctaacaagagacctacaccttgggaggcggcggccaagtcccctctcggt
ctagtggatgaggccttcagacccaggaacatcgaggaatccattgtggcgaatgtagtc
tctgcagctcggaggaaggtgtttgcagggtcccaagaggactggaaagagagactgtcc
tttgtccctcaaactcagaagaccagcatgagcttttctgaaaggcgagagtataatgtt
ccatccccagtcaacagccacgtgtctagccactccttatatagctcccagttgccatat
gtatgctacaggaaggagtccagaaatgatttgaaagcaatgtccatggacacgaggtct
gaatactgtcttccactaggtggttatgactataacccacacccaagggggtggagacac
caaccatga
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