Rattus norvegicus (rat): 679140
Help
Entry
679140 CDS
T01003
Symbol
Exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
679140 (Exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
679140 (Exosc1)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
679140 (Exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
679140 (Exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
679140
NCBI-ProteinID:
NP_001388162
RGD:
1591855
Ensembl:
ENSRNOG00000048708
LinkDB
All DBs
Position
1:complement(250684746..250694748)
Genome browser
AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKTSENGALPVVSVMRETE
SQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacctgtgaggtactgcatcccgggcgaacgtctgtgtaacttggaggaaggc
agcccgggcagcggcacctacacccggcacggctacatcttttcgtcgctggctggctgc
ctgacgaagaccagcgagaatggcgcgcttcccgtggtatcagtaatgagagagacagag
tcccagttacttccagatgtgggagctgtcgtcacctgtaaggtctctagcatcaactca
cgttttgccaaagtacacatcctgtatgtaggatcgacaccacttaaaaatgcttttcgg
ggaactatccgcaaggaagatattcgagcaactgaaaaagacaaggtagaaatttacaag
agtttccggccaggtgatatagttttggccaaagttatctccctaggtgatgcacagtcc
aattacctgctgacgactgctgaaaatgagttaggggttgtggtggcccacagtgagtca
ggtgtccagatggtccccatcagctggtgtgagatgcagtgccccaagacccacactaaa
gaattccgaaaagtagccagagtacagcctgagttcttacaaacctga
DBGET
integrated database retrieval system