Rhodococcus opacus PD630: Pd630_LPD00009
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Entry
Pd630_LPD00009 CDS
T03071
Definition
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roa03032
]
Pd630_LPD00009
03400 DNA repair and recombination proteins [BR:
roa03400
]
Pd630_LPD00009
Enzymes [BR:
roa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Pd630_LPD00009
DNA replication proteins [BR:
roa03032
]
Prokaryotic type
DNA Topoisomerases
Pd630_LPD00009
DNA repair and recombination proteins [BR:
roa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pd630_LPD00009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHK27260
LinkDB
All DBs
Position
9967..12009
Genome map
AA seq
680 aa
AA seq
DB search
MAAQKSDKSTSSKDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEA
MAGHASKVEITLLEDGGVQVVDDGRGIPVGMHASGVPTVEVVLTQLHAGGKFDSDSYAVS
GGLHGVGISVVNALSTRLDVDIKRDGFQWNQTYTDSKPGELVKGEATKETGTTVTFWADP
NIFETTVYSFETVARRLQEMAFLNKGLTITLTDERVSDAEVTEEVVSQVADAPKTAEDES
AEAGAPAVHKVKTRVYHYPGGLEDYVRHINRTKQPIHNSVVGFTAKGTGHELEIAMQWNS
GYSESVHTFANTINTHEGGTHEEGFRSALTATVNKYALDKKLLKEKDPKLTGDDIREGLA
AIISVKVGEPQFEGQTKTKLGNTEVRSFVQKASNEHLSHWFEANPADAKTIVNKAVSSAQ
ARVAARKARELVRRKSATDLGGLPGKLADCRSNDPSKSEIYIVEGDSAGGSAKSGRDSMY
QAILPLRGKIINVEKARIDRVLKNTEVQSIITAFGTGIHDEFDIAKLRYHKIVLMADADV
DGQHIATLLLTLLFRFMRPLVEHGHVYLAQPPLYKLKWQRSDPEFAYSDRERDVLVKAGL
ESGKKINKDDGIQRYKGLGEMNAKELWETTMDPTVRVLRLVTLDDAAAADELFSVLMGED
VEARRSFITRNAKDVRFLDV
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcccagaagtcagacaaaagcacctccagcaaggactacggcgcttcttccatc
accgtcctcgagggactcgaagccgttcgtaagcgaccgggtatgtacatcggttccacc
ggtgaacgtggtctccaccatttgatctgggaagtcgtcgacaactccgtcgacgaggcc
atggccggccacgccagcaaggtcgagatcaccctcctcgaagacggtggcgtccaggtc
gtcgacgacggtcgaggcatccccgtcgggatgcacgcctccggtgtccccaccgtcgag
gtcgtcctcacccagctccacgccggcggcaagttcgactccgactcctacgccgtgtcc
ggcggtctgcacggtgtcggtatctccgtcgtcaacgcgctgtccaccaggctcgacgtc
gacatcaagcgcgacggcttccaatggaaccagacctacaccgactcgaagccgggtgaa
ctcgtcaagggcgaggccaccaaggaaacgggcaccacggtcacgttctgggccgacccg
aacatcttcgagaccacggtctacagcttcgagacggtcgcgcgccgcctccaggagatg
gccttcctcaacaagggcctcacgatcaccctcaccgacgagcgcgtcagcgacgccgag
gtcaccgaagaggtcgtcagccaggtcgcggacgcgccgaagaccgccgaggacgagtcc
gccgaggcgggtgcgcctgccgtgcacaaggtgaagacccgcgtctaccactacccgggc
ggcctcgaggactacgtgcggcacatcaaccgcacgaagcagccgatccacaactccgtc
gtcggtttcaccgcgaagggcaccggccacgaactcgagatcgcgatgcagtggaactcc
ggttactcggagtcggtccacacgttcgcgaacaccatcaacacccacgagggcggcacc
cacgaagagggcttccgttccgctctgacggcgacggtcaacaagtacgcgctcgacaag
aagctcctcaaggagaaggacccgaagctcaccggtgacgacatccgtgagggcctcgcg
gcgatcatttcagtgaaggtcggtgaaccgcagttcgagggtcagacgaagacgaagctc
ggtaacaccgaggtccggtcgttcgtgcagaaggcgagcaacgagcacctgtcgcactgg
ttcgaggcgaatccggccgacgcgaagaccatcgtgaacaaggcggtgtcgtcggcgcag
gcccgcgtcgccgcccgcaaggcccgcgaactggtgcgccgcaagagcgcgaccgatctc
ggcggcctgccgggcaagctcgccgactgccggtccaacgatccgagcaagtccgagatc
tacatcgtggagggtgactccgcaggcggctcggccaagtccggccgcgactcgatgtat
caggcgatcctgccgctgcgcggaaagatcatcaacgtcgagaaggcacgcatcgaccgt
gtgctgaagaacacggaagtccagtcgatcatcaccgcgttcggcacgggcatccacgac
gaattcgacatcgcgaagctgcggtaccacaagatcgtgctgatggccgacgccgacgtc
gacggccagcacatcgcaacgctgctgctcacgctgctgttccgcttcatgcgcccgctc
gtcgagcacggccacgtctacctggcacagcccccgctgtacaaactgaagtggcagcgc
agcgacccggagttcgcgtactccgaccgcgagcgcgacgtcctggtcaaggccggcctc
gagtccggcaagaagatcaacaaggacgacggcatccagcgttacaaaggtctcggcgag
atgaacgccaaggaactgtgggagaccacgatggatccgacggtgcgcgtcctgcgtctg
gtgacgctcgacgacgcggccgcagccgacgagctgttcagcgttctcatgggtgaggac
gtcgaggcccggcgtagcttcatcacccgtaacgccaaggatgtccgcttcctcgacgtc
tag
DBGET
integrated database retrieval system
