KEGG   Rhodococcus opacus PD630: Pd630_LPD05222
Entry
Pd630_LPD05222    CDS       T03071                                 

Definition
(GenBank) Uncharacterized protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa03030  DNA replication
roa03430  Mismatch repair
roa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:roa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pd630_LPD05222
   03430 Mismatch repair
    Pd630_LPD05222
   03440 Homologous recombination
    Pd630_LPD05222
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:roa03032]
    Pd630_LPD05222
   03400 DNA repair and recombination proteins [BR:roa03400]
    Pd630_LPD05222
Enzymes [BR:roa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Pd630_LPD05222
DNA replication proteins [BR:roa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Pd630_LPD05222
DNA repair and recombination proteins [BR:roa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Pd630_LPD05222
SSDB
Motif
Pfam: RNase_T DUF5051 GIY-YIG RNase_H_2
Other DBs
NCBI-ProteinID: AHK32428
LinkDB
Position
5410921..5412687
AA seq 588 aa
MSAPGVPEQLRFDELDTPLRDTTFVVVDLETTGARPGEDAITEIGAVKIRGGEVIAEMAT
LVDPGRSIPPHIVEITGITTAMVIDAPRIERVLPAFLEFARGAVLIAHNAPFDTGFLKAA
ASATDTPWPKFTVLCTVKLARRVLSRDEAPSVKLSSLARLFDVGTTPTHRALDDARATVD
VLHALIARVGNQGVHSLTELVDYLPDVSSHQRAKRSLAGHLPHAPGVYLFRGPSDEVLYV
GTATDLRRRVRNYFTGSETRGRMKEMVALTTRIDHVECAHALEAGVRELRLLAAHTPPYN
RRSKYPKRGWWITLTAEAFPRLSVARTPTADSLGPFRSRSTAVDVADVLAEYCILRTCTS
RIPKGREHGPQCPPRELGRCPASVHDRVTEDAYRPGPELFRQFLRGLDDSPLHRMRARVE
ELAAGELFENAARLRDRTAEVVLALRRMQRLAALTALDQLVAARPAVTGGWEFAVIRSGR
LASAGCARRGIHPMPVVDALVLTAETVVPDATPLRGASPEEAGLLARWLDQEDTRIVSAS
AGWCEPARGAGSWSEWCALARAGSASTREAETRPPAPSSADHRLGWRS
NT seq 1767 nt   +upstreamnt  +downstreamnt
gtgagtgcccccggtgtacccgaacagctgagattcgacgagctcgacaccccactgcgg
gacaccacgttcgtggtggtcgatctcgagaccaccggcgcacggccgggcgaggacgcc
atcaccgagatcggcgccgtgaagatccgcggcggcgaggtgatcgccgaaatggccact
ctcgtcgacccgggacggtccatcccgccgcacatcgtggagatcaccggcatcaccacc
gccatggtgatcgacgccccgcggatcgagcgagtgctgccggcgttcctggagttcgca
cgcggggccgtgctcatcgcccacaacgccccgttcgacacgggcttcctcaaggccgcg
gcgtccgccaccgacaccccctggcccaagttcaccgtgctctgcaccgtcaaactggcc
cggcgcgtcctcagccgcgacgaagcgccgtccgtcaagctgtcgtcgctggcccggctg
ttcgacgtcgggaccactccgacccaccgggcgctcgacgacgcccgtgccaccgtcgac
gtcctgcacgccctcatcgcgagggtcggcaatcagggagtgcacagtctcaccgaactc
gtcgactacctgcccgacgtctcctcacaccagcgggcgaaacgctcactcgccggccat
ctcccccacgcccccggcgtctacctgttccgcggaccgtccgacgaggtcctctacgtc
ggcacggcgaccgatctgcgccggcgggtgcgcaactacttcaccggctccgagacgcgc
ggccggatgaaggagatggtggccctgaccacccggatcgaccatgtcgagtgcgcgcat
gcgctcgaggccggtgtgcgcgagctccggctgctcgccgcgcatacgccgccgtacaac
cggaggtccaagtacccgaaacgcggctggtggatcacgctcaccgcggaggccttcccc
cggctgtcggtggcgcgtaccccgaccgccgactcgctcggtccgttccggtcccgctcg
accgccgtcgacgtcgccgacgtcctcgccgagtactgcattctccgcacctgcacgagc
cgcatcccgaagggaagggagcacggtccgcagtgcccgccccgcgagctcggacgctgc
ccggcgtccgtccacgaccgcgtcacggaggacgcctaccgtcccgggccggaactcttc
cggcagttcctgcgcggcctggacgactccccgctgcaccgcatgcgcgcacgggtggag
gagctggccgccggcgagttgttcgagaacgccgcacgcctgcgtgatcgcaccgcggag
gtcgtcctcgcgttgcgcagaatgcagcgcctggccgccctcaccgccctcgatcagctc
gtggccgctcgcccggccgtcaccggcggctgggagttcgcggtgatccgttccgggcga
ctcgcgtccgcgggctgcgcccggcgcggaatccatccgatgccggtggtcgatgcgctc
gtcctcaccgccgaaaccgtcgttcccgacgcaactccgcttcgcggcgcgtcccccgag
gaggccggactgctggcgcgctggctcgaccaggaggacacccgcatcgtcagcgcctcc
gcgggctggtgcgagcccgcgcggggcgccggatcctggtccgagtggtgcgcactcgcc
cgagcggggagcgcgtcgacacgggaagccgagacccgaccacccgcgccgagttccgcc
gaccaccgcttaggctggcgatcatga

DBGET integrated database retrieval system