Roseovarius sp. THAF27: FIU89_06330
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Entry
FIU89_06330 CDS
T06352
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
roh
Roseovarius sp. THAF27
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
roh03009
]
FIU89_06330 (rluD)
Enzymes [BR:
roh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
FIU89_06330 (rluD)
Ribosome biogenesis [BR:
roh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FIU89_06330 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QFT80224
UniProt:
A0A5P9H0K3
LinkDB
All DBs
Position
1256888..1257931
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AA seq
347 aa
AA seq
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MGAAPLESSVTVRIGADPPPRLDKALARDVPEAASLSRTRLARLIAEGAVRVGGVVVDDP
KAKVAEGDIVEITVPVAAEVDVVAQEIALDVVFEDDDLIVIDKPAGMVVHPAPGSPDGTL
VNALLHHFGGSLSGVGGEKRPGIVHRIDKDTSGLLVVAKSDRAHHGLAAQFESHSVERKY
LAVVHGVPDAADPRLRGVRGASFEAGNILKLTTQLARHKTDRQRQAVLFEGGRHAVTRAR
VVKPFGVPPQVALIECWLETGRTHQIRVHMAHAGHGLIGDPVYGGRRKLNAKALSPGALD
AAQSFPRQALHAALLGFEHPGTGEMLRFEAALPEDMANLLQELGTAA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcagcccccctggaatccagtgtcaccgtgcggatcggggccgatccgccgccg
cgccttgataaggcgcttgcgcgcgatgtgccagaggcagcgtcgctgtcgcgcacgcgg
ctggcgcggctgatcgccgagggcgcggtgcgcgtgggtggtgtggtggtcgacgatccc
aaggcgaaagtggccgaaggcgacatcgtcgagatcaccgtgccggtggccgccgaggtg
gacgtggtggcgcaggagatcgcgctggacgtggtgttcgaggatgacgacctgattgtg
atcgacaagcccgcgggcatggtggtgcatcccgcgccgggcagcccggatggcacgctg
gtcaatgcgctgttgcaccatttcggcggcagcctgtccggcgtgggcggcgagaaacgg
cccggcatcgtccaccggatcgacaaggataccagcggtctgttggtggtggcgaagtcg
gaccgggcgcatcacgggctggccgcgcagttcgagtcgcatagcgtcgagcgcaagtac
ctggccgtagtgcacggggtgccggatgccgcagatccgcggctgcgcggcgtgcgtggg
gccagtttcgaggcgggcaatattctgaagctgacgacgcagctggcgcggcacaagacc
gaccggcagcggcaggcggtgctgttcgaaggcgggcggcacgcggtgacacgggcgcgc
gttgtaaaaccgttcggggtgccgccgcaggtggcgctgatcgagtgctggctggagacg
gggcggacgcaccagatccgggtgcacatggcgcatgcggggcatggcctgatcggcgac
cccgtttatggtgggcggcgcaagctgaatgcgaaggcgttgtcgccgggcgcgctggac
gccgcgcaaagtttcccacggcaggcgttgcatgcggcgctgctggggttcgagcatccg
ggtacgggggagatgctgcgctttgaggcggcgctgccggaggacatggcaaacctgctg
caggaactgggcaccgcagcctga
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