Roseovarius faecimaris: EI983_17760
Help
Entry
EI983_17760 CDS
T06338
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rom
Roseovarius faecimaris
Pathway
rom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EI983_17760 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rom03019
]
EI983_17760 (recQ)
03400 DNA repair and recombination proteins [BR:
rom03400
]
EI983_17760 (recQ)
Enzymes [BR:
rom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EI983_17760 (recQ)
Messenger RNA biogenesis [BR:
rom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EI983_17760 (recQ)
DNA repair and recombination proteins [BR:
rom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EI983_17760 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QGY00015
UniProt:
A0A6I6IVA3
LinkDB
All DBs
Position
3576861..3578900
Genome browser
AA seq
679 aa
AA seq
DB search
MTGAATLLKDVFGFDAFRPGQEEIVSAVTAGENVLAIMPTGGGKSLCFQLPALMREGVTV
VISPLIALMRDQVRALKAAGVEAGALTSGNTEDETNAVWQALDDGRLKLLYIAPERLAAG
SALNMLRRIGVSLIAVDEAHCVSQWGHDFRPDYLRIGELRRALDVPLAAFTATADAETRE
EIVAKLFDGHAPQSFLHGFDRPNLHLAFAAKDSPRKQILSFAAARKGQSGIVYCGTRAKT
ETLAQALRETGHVAAAYHGGMLPEDRREVEARFNVEDGLIVVATVAFGMGVDKPDIRWVA
HADLPKSIEAYYQEIGRAGRDGAPAETLTLFGADDIRLRRAQIDEGLAPPERRMADHARL
NALLGLAEAHECRRAKLLQYFGEEADGCGNCDLCDTPPETFDGTEAVRKALSAILRTDEW
FGAGHLIDILTGTLTDKIRARRHDELPTFGVGQDVSRHAWQGIFRQMMGHDLIRPDPERH
GALRMTEAARPILRGEESIILRRDTLITKTRRAAPKALVSDEDAPLLSALKAKRRALAEA
AKVPAYVVFNDRTLIEMAETRPQTLDEMAGITGVGAKKLERYGDDFLNVITGEAARLHPS
RRKLAGRMAGSLYDQLLQVQSDLVRGQDGHEKPLSCSASLLAKVASHRPSSAEDLARLLG
EKRAERFGPAFLDVLATAD
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcgctgccacgctattgaaagacgtgttcggcttcgacgccttccgccccggg
caggaggagatcgtgagtgccgtcaccgcaggcgagaacgtgctcgccatcatgccgacg
ggtggcggtaaatcgctgtgcttccagcttccggcattgatgcgcgaaggggtcactgtt
gtcatctcgccgctcattgccctgatgcgcgaccaggtgcgcgcactcaaagcggcgggc
gtggaggcgggcgcgctgacttcgggcaataccgaggacgagaccaatgcggtctggcag
gcgctggacgacggtcggctgaagctgctctatatcgcgcccgagcggctcgccgccgga
tcggccctcaatatgctgcgacgcatcggtgtcagcctgattgccgtggacgaggcgcat
tgcgtcagccagtggggccatgattttcgccccgactacctgcgtatcggcgagctgcgc
cgtgctctcgatgtgccgcttgccgccttcactgccaccgccgatgcggagacgcgcgaa
gagatcgtcgccaagctctttgacggccacgccccgcaaagcttcctgcacgggttcgac
cgccccaacctgcacctcgcctttgccgccaaggacagcccgcgcaagcagatcctcagc
tttgccgccgcccgcaaggggcagtcgggcatcgtctattgcggcacccgcgccaagacc
gaaaccctggcccaggctttgcgcgagacgggccatgtggccgcggcctatcatggcggg
atgctgcccgaggaccggcgcgaggtcgaggcgcggttcaatgtcgaggacgggctgatc
gtggtggcgacggtcgcctttggcatgggcgtggacaagcccgatatccgttgggtcgcc
catgccgatctgcccaaatccatcgaagcctattaccaggagatcggccgcgccggacgc
gatggcgccccggccgagacgctcacattgttcggcgccgatgacatccgcctgcgccgg
gcccagatcgacgagggcctcgccccgcccgaacgccggatggccgatcatgcgcggctc
aacgcccttctcgggcttgccgaagcgcatgaatgccgccgcgccaagctgctgcaatac
ttcggcgaagaggcggatggttgcggcaattgcgatctgtgcgatacgccgcccgagacc
ttcgacggcaccgaagcggtgcgcaaggcgctctcggccatcctgcgcaccgatgaatgg
tttggtgcgggccacctcatcgacatcctgaccggcaccctgaccgacaagatccgcgcg
cgccgccatgacgagctgccgacctttggcgtcggacaggatgtatcgcgacacgcctgg
caaggcattttccggcagatgatgggccatgacctgatccgccccgaccccgaacgccac
ggcgccttgcgcatgaccgaagccgcccgcccgatcctgcgcggggaggaaagcatcatc
ctgcgccgcgacacgctgatcacaaaaacccggcgcgccgcgcccaaggcgctcgtttct
gatgaggatgcgccgcttctctccgcgctcaaggccaagcgccgggcattggccgaggcg
gccaaggtgcccgcctatgtggtgttcaacgaccggacgctgatcgagatggccgagacg
cggccgcagaccctggacgagatggccggcatcacaggcgtgggcgccaagaaactggaa
cgctatggtgacgatttcctgaacgtgatcactggcgaagcggccaggctgcacccctcc
cggcgcaagcttgccgggcgcatggcaggctcgctctatgatcaacttttgcaggtgcag
tccgatctggtgcgggggcaggacgggcatgaaaagccgctgagctgttcggcgtcgctg
ctggccaaggtcgcctcgcaccgcccgtccagcgccgaagacctcgcgcgtctcctgggc
gagaaacgcgccgaaagatttggcccagcctttctggacgttctggccacggcggactag
DBGET
integrated database retrieval system
