Raoultella ornithinolytica S12: TE10_23030
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Entry
TE10_23030 CDS
T03629
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
ron
Raoultella ornithinolytica S12
Pathway
ron00040
Pentose and glucuronate interconversions
ron01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TE10_23030
Enzymes [BR:
ron01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
TE10_23030
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
AJF74745
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Position
5029432..5030607
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AA seq
391 aa
AA seq
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MAKGMRVKLNYEVSRDPDTGAEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHW
NYYLLDIAAAEAVQLTEGAGDNTFGGFLSPDDTSLYYVKNDRTLLEVNLTTLQEREVYRV
ADEWVGYGTWVANSDCSKLVGIEIAKSDWTPLNDWQTFHDFFHKGPHCRLLGVDLQTGES
RTIHEEKNWLGHPIYRPFDDNTVAFCHEGPHDLVDARMWMVNEDGSSVRKVKEHAEGESC
THEFWVPDGSALMYVSYLKGQQGRTVYRFNPDSGVNEALMQMPACSHLMSNFDGTLLVGD
GSGTPVDVKDTSGYTIDNDPYLYVFDVAKRAFFRVARHDTSWATIANSRQVTHPHPSFTP
DDSAILFSSDKDGKPAIYIAKLPEQHEMLQA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggcatgcgggtaaaactcaactatgaagtcagccgcgatcccgataccggg
gcagaggtcacccgcttaacccctccggaagtgacctgccatcgtaactatttctatcag
aaatgctttttcaacgacggtagccatctgctgttcgccggtgaattcgacgggcactgg
aactactacctgctggatatcgccgcggccgaagccgtccagctcaccgaaggggccggc
gacaacaccttcggcggcttcctctcgccggacgatacctccctctattacgttaaaaat
gaccgcacgctgctggaagttaacctcaccaccctgcaggagcgcgaagtctatcgcgtc
gccgacgaatgggtgggctacggaacctgggtcgccaacagcgactgcagcaagctggtc
ggcattgagatcgccaaaagcgactggacgccgctcaacgactggcagaccttccacgac
ttcttccataagggtccgcactgccgcctgctgggcgtcgatttgcaaaccggtgaaagc
cgcaccatccatgaagagaaaaactggctgggccatcctatttatcggccgtttgatgac
aacaccgtcgccttctgccacgaaggcccgcacgatctggttgatgcccgcatgtggatg
gtgaatgaagacggcagcagcgtacgtaaagtcaaagagcatgccgagggcgaaagctgc
acccacgagttctgggtgccggacggctcggcgctgatgtacgtctcctacctgaagggc
cagcagggacgcaccgtttaccgctttaatccggatagcggcgtgaacgaagcgctgatg
cagatgcccgcctgttcgcatctgatgagtaactttgacggcacgctgctggtgggcgac
ggttccggcaccccggtagacgtgaaggataccagcggctataccatcgataacgacccc
tatctgtacgttttcgacgtggcgaagcgggccttcttccgcgttgcgcgtcacgatacg
tcgtgggcaaccatcgccaacagccgccaggtgacccatccgcacccctcctttaccccg
gacgatagcgcgatcctgtttagctccgataaggacggtaaaccggctatctatatcgcg
aagctccccgagcagcacgagatgctgcaggcataa
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