Raoultella ornithinolytica B6: RORB6_10825
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Entry
RORB6_10825 CDS
T02625
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase fraction C
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00550
Peptidoglycan biosynthesis
ror01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RORB6_10825
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ror01002
]
RORB6_10825
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ror01011
]
RORB6_10825
Enzymes [BR:
ror01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RORB6_10825
Peptidases and inhibitors [BR:
ror01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RORB6_10825
Peptidoglycan biosynthesis and degradation proteins [BR:
ror01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RORB6_10825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
AGJ86851
LinkDB
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Position
complement(2365609..2366811)
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AA seq
400 aa
AA seq
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MTHDAFSLRGLVAGCALLVLVAPAVQAAEQLPDAPSIDARAWILMDYASGKVLSEGNADE
KLDPASLTKIMTSYVVGQALKAGKIKSTDMVTVGRDAWATGNPALRGSSVMFLKPGMQVS
VEDLNKGVIIQSGNDASIAIADYVAGSQDAFVSLMNGYAQKMGLTNTTFMTVHGLDAPGQ
FSTARDMALLTKAMIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNADGVKTGTTA
GAGYNLVSSATQGDMRLIAVVLGTKTDRIRFNESEKLLTWGFRFYETVTPIKPDATFITQ
RVWFGDSNEAKLGAGEAGSITLPRGQLKNLKASYTLTDTQLTAPLSKGQVVGTIDFKLND
KTIEQRPLIVMEAVNEGGFFSRMMDFVLMKLHGWFGSWFS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatgacgctttttctcttcgcggcctcgtggcaggctgcgcgcttctcgttctt
gtcgcacctgcggtgcaggctgcggaacaactccccgatgccccatcgatcgatgcccga
gcctggatcctgatggattacgccagcggtaaagtgctgagcgagggcaacgccgatgaa
aaactcgacccggcaagtctgaccaagatcatgaccagctatgtcgtcggacaggcgctg
aaggcgggcaagattaagtccaccgatatggtcaccgtcggtcgcgatgcctgggctacc
ggtaacccggcgctgcgcgggtcatcggtgatgttccttaagccggggatgcaggtttca
gtcgaagacctgaataaaggcgtgattatccagtccggcaacgatgccagcatcgcgatc
gccgactacgtggcggggagccaggatgcattcgtcagcctgatgaacggctatgcgcaa
aaaatggggctgaccaataccacctttatgaccgtgcacggcctggatgcgccgggccag
tttagtaccgcgcgcgacatggcgctgctgaccaaagcgatgattcatgacgtgcctgaa
gagtacgccattcataaagagaaagagtttaccttcaataagattcgtcagccgaaccgc
aaccgcctgctgtggagctcaaacctgaacgcggatggcgtcaaaacagggaccaccgcc
ggcgctggctacaacctggtctcctcggctacccagggagacatgcgtctgattgccgtg
gtgctcggcaccaagaccgaccgtattcgttttaatgaatccgaaaagctgctgacctgg
ggcttccgtttctacgagaccgtgacgccgattaaaccggatgccacctttatcacccag
cgcgtctggtttggcgacagcaacgaagccaaactcggggcgggcgaagccggttcgatc
accctgccgcgcgggcagctgaaaaacctgaaagccagctataccctgacggatacgcag
ctgacggcgccgcttagcaaagggcaggtggtcgggaccatcgactttaagctcaatgat
aaaaccatcgagcagcgcccgctgatcgtcatggaagcggtcaatgaaggcggtttcttt
agccggatgatggacttcgtgctgatgaaactgcacggctggttcggtagctggttctca
taa
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