Raoultella ornithinolytica B6: RORB6_21920
Help
Entry
RORB6_21920 CDS
T02625
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RORB6_21920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ror03400
]
RORB6_21920
Enzymes [BR:
ror01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
RORB6_21920
DNA repair and recombination proteins [BR:
ror03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RORB6_21920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGJ89064
LinkDB
All DBs
Position
4814211..4814717
Genome browser
AA seq
168 aa
AA seq
DB search
MINDILAPDLRVVFCGINPGKSSAHTGFHFAHPGNRFWKVIYQAGFTDRLLKPEEELQLL
DTRCGITMLVERPTVQASEVALQELRSGGRELVLKIEQYQPRALAILGKQAFEKAFQVRG
ARWGKQQVTIGDTEVWVLPNPSGLNRATLDKLVEAYRELDDALASRGR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgattaacgatattctggcgccggacctgcgggtggtcttctgcggcatcaatccgggg
aagtcctctgcccatactggttttcatttcgcgcatccgggtaatcgcttctggaaggtg
atttaccaggccggttttaccgaccgtctgctgaagcctgaagaggagctgcagctgctc
gatacgcgctgcgggatcactatgctggtggaacgcccgacggttcaggccagcgaagtc
gccctgcaggagctacgcagcggcggccgggagctggtgctgaaaattgaacagtatcag
ccgcgggcgctggcgattctcggtaaacaggcctttgagaaagcgtttcaggtacgcggt
gcgcgttggggcaagcagcaggtgaccatcggcgatacggaagtgtgggtgctgcccaac
cccagcggactgaaccgggcgacgctggataagctagtggaggcgtatcgtgaactggat
gatgcgctggcatcgcgaggtcgatag
DBGET
integrated database retrieval system
