KEGG   Rahnella sikkimica: BV494_17700
Entry
BV494_17700       CDS       T05331                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
rox  Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:rox00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rox03400]
    BV494_17700
Enzymes [BR:rox01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BV494_17700
DNA repair and recombination proteins [BR:rox03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BV494_17700
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 PhoH AAA_11
Other DBs
NCBI-ProteinID: AVF36647
UniProt: A0A2L1UUS0
LinkDB
Position
3841994..3844018
AA seq 674 aa
MRLNPSQQHAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRECGYQARHIAAVTFTNKAA
REMKERVAQTLGRKESRGLLIATFHTLGLEIIKREFAALGMKSNFSLFDDQDQLALLKEL
SEKWLENDKTLLQQLISTISNWKNDLVDPSHAAGLARSERDQIFAHCYGLYHDHMRACNI
LDFDDLILLPTLLLQKNEEVRERWQNKLRYLLVDEYQDTNTSQYMMVKLLVGNRARFTVV
GDDDQSIYSWRGARPQNLVLLKEDFPQLQVVKLEQNYRSSQRILKAANILIANNPHVFEK
RLFSELGYGETLKVVTANNEDHEAERVVGELIAHHFINKTGYGNYAILYRGNHQSRLFEK
MLMQNRIPYRISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPRREIGAATLQK
LGEWANQRNKGLFKASFDMGLSQYLTGRGLESLQRFTHWMGTLSERVEREPVAAVRDLIH
GIDYESWLFETSPSPKAAEMRMKNVNQLFSWMTEMLEGTDLDEPMTLTQVVTRFTLRDMM
ERGENDEELDQVQLMTLHASKGLEFPYVFLVGMEEGLLPHQSSIDEDNVDEERRLAYVGI
TRAQKELTFTLCRERRQYGELIRPEPSRFLMELPQDDLAWESERKVVSAQERMVKGQSHL
EKIREQLAKAKGGN
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgcgattaaaccccagccaacaacatgccgtcgaattcgtcaccgggccctgcctggtt
ctggcgggtgctggctccggcaaaaccagggtgattaccaataaaatcgcacacctgatc
cgcgagtgcggctatcaggcccgccacattgcggccgtgaccttcaccaataaagcggcg
cgcgagatgaaagagcgtgtggcgcaaacccttgggcgaaaagaatcgcgcggcttgctg
atcgcaactttccatacgctggggctggaaatcatcaagcgcgaatttgccgcgctgggc
atgaaatccaatttctccttgttcgacgatcaggaccagctggctcttctcaaagagctg
agcgagaagtggctggaaaatgacaaaacgctgttgcaacagctgatctcgacgatctca
aactggaagaacgatctggttgatccgtcccatgcggcgggccttgcgcgatcggagcgc
gatcagatcttcgcgcactgctacgggctttatcatgaccatatgcgcgcctgtaatatt
ctcgacttcgatgacctgatcctgctgccgacgctgctgttgcagaagaatgaagaagtg
cgcgagcgctggcagaacaaactgcgctatctgctggtcgatgaatatcaggacaccaac
accagtcagtacatgatggtgaaactgctggtcggcaaccgcgcgcgttttaccgtggtt
ggcgacgacgatcagtccatttactcctggcgcggcgcgcgtccacaaaacctggtgctg
ctgaaagaagatttcccgcagttgcaggtggttaagctcgagcagaactaccgttcctcg
cagcgcattctgaaagcggccaacatcctgatcgccaacaacccgcatgtgttcgagaag
cggcttttctctgaactgggttacggcgagacgctgaaagtggtgaccgccaacaatgaa
gatcacgaagccgagcgcgtggttggcgagctgattgcgcaccactttatcaacaagacc
ggctatggtaattacgcgattttgtaccgcggtaatcaccagtcgcgcctgtttgaaaaa
atgctgatgcagaaccgcattccgtaccgcatttccggtggcacatcgttcttctcgcga
cctgagattaaagatttgctggcctatctgcgcgtcctgaccaaccctgacgacgacagc
gcattcctgcgtatcgtaaatacaccgcgccgtgaaatcggtgccgcgacgctgcaaaag
ctgggtgaatgggcgaatcagcgcaataaaggtttgttcaaagccagcttcgatatggga
ttgagtcagtatctgaccgggcgcggcctggaatcactgcaacggttcacgcactggatg
ggcactctttctgagcgggtcgaacgcgaaccggtcgcggcggtacgggatctgatccac
ggcatcgattacgaaagctggttgttcgaaacctcgccgagtccgaaagcggcagaaatg
cgcatgaaaaacgtcaatcagcttttcagctggatgactgaaatgctcgaaggcaccgat
ctggatgagccaatgaccctcacgcaggtggtcacccgatttacgctgcgcgacatgatg
gaacgcggtgaaaacgatgaagaactggatcaggttcagttgatgacgctgcacgcctcg
aaagggctggaattcccgtatgtgtttctggtcggcatggaagaaggcttgttgccgcac
cagagcagcatcgatgaagacaatgtcgatgaagaacgccgtctggcgtatgtgggtatt
acccgcgcccaaaaagaactgacgtttacgctttgccgcgaacgccgtcagtacggcgaa
ttaattcgccctgaacccagccgctttttgatggagttgccgcaggatgatttagcctgg
gaaagtgagaggaaagtcgtcagtgcgcaggaacggatggtgaaagggcagagccatctg
gagaaaatccgcgagcagctggcgaaagccaaaggcggaaactga

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