Rahnella sikkimica: BV494_18920
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Entry
BV494_18920 CDS
T05331
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rox03019
]
BV494_18920
03009 Ribosome biogenesis [BR:
rox03009
]
BV494_18920
Messenger RNA biogenesis [BR:
rox03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BV494_18920
Ribosome biogenesis [BR:
rox03009
]
Prokaryotic type
rRNA processing factors
BV494_18920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AVF36862
UniProt:
A0A2L1UV70
LinkDB
All DBs
Position
4104472..4105941
Genome browser
AA seq
489 aa
AA seq
DB search
MTAELLVNVTPSETRVAYIDGGILQEIHIERETKRGIAGNIYKGRISRVLPGMQAAFVDI
GLEKAAFLHASDIMPHTECVARDEQKNFHVRDIAELVHQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESEAERDRLKRIVSEYCDEHGGYIIRTAAEGVGEE
ELKQDAAYLKRLWTKVMERKRRNKTKCKLYGELALAHRVLRDFAGEALDRIRVDSRLTYE
LLVEFTSEYMPEMTSKLEHYSGKQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAM
TTVDINTGAFVGHRNLEDTIFNTNTEATQAIARQLRLRNLGGIIIIDFIDMSNEDHRRRV
LHSLEQALSKDRVKTGIHGFSALGLVEMTRKRTRESVEHVLCSDCPTCHARGTVKTVETV
CYEILREIVRVHHAYESDRFLVYASAAVGEALKGEESHALAEVEIFVGKQVKVQIEPLYS
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaattattggtcaatgtcaccccgtctgaaacccgcgtggcctacattgac
ggtggcattctgcaggaaatccatattgagcgtgagaccaagcgcgggattgccggcaac
atttataaaggacgtatcagccgtgtattgcctgggatgcaggcagcatttgtggatatc
ggccttgaaaaagcagcatttttgcacgcttcagacatcatgccgcacaccgaatgtgta
gcgcgtgacgagcagaaaaatttccatgtgcgcgacatcgcagagctggtgcatcagggc
caggatctgatggttcaggtggtgaaagatcccctgggcaccaaaggcgcgcgcctgacg
accgacattacgttgccatcccgttatctggtgtttatgccgggagcctctcacgtcggc
gtatcgcagcgcatcgaaagcgaagcagaacgtgaccgcctcaagcgcatcgtctcagaa
tattgtgacgaacacggcggctatattattcgtactgcagccgaaggtgtgggcgaagaa
gagcttaagcaggatgccgcgtatttaaaacgcctgtggaccaaagtcatggaacgcaag
cgtcgtaacaaaaccaagtgcaagctgtatggcgaactggcgctggcgcaccgcgtgctg
cgtgatttcgccggcgaagcgctggacaggatccgcgttgactcccgtctcacgtatgaa
ctgctggtggagtttaccagcgaatacatgccggagatgaccagcaagctggagcattac
agcggcaagcagccgattttcgacctgttcgatgtggaaaatgaaatccagcgcgcgctc
gagcgtaaggtcgagctgaaatccggcggctatctgatcatcgatcagaccgaagccatg
accaccgtggatatcaataccggtgcgtttgtcggccatcgtaatctggaagacaccatc
ttcaacaccaacaccgaagcgacgcaggccattgcgcgacagctccggttgcgcaatctc
ggtggcattatcatcatcgactttatcgatatgtcgaatgaagatcaccggcgtcgcgtg
ttgcacagcctcgaacaggcattatccaaagaccgcgtgaaaaccggcattcacggtttc
tctgcactcggtctggtggaaatgacccgcaagcgcacccgcgaaagcgtggagcatgtg
ctgtgcagcgattgcccgacctgtcacgcgcgtggcactgtgaaaacggtcgaaacggtg
tgctatgaaattctgcgtgaaatcgtacgcgtgcatcatgcctacgagtctgaccgtttc
ctggtctacgcgtctgcggctgtgggtgaagcgctgaaaggcgaagaatcacatgcgctg
gccgaagtcgaaatcttcgtcggaaaacaggtcaaagtgcagattgaaccgctctacagt
caggagcagttcgacgtggtgatgatgtga
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