Rhizobium oryzihabitans: G3A56_13745
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Entry
G3A56_13745 CDS
T06770
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
roy
Rhizobium oryzihabitans
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
roy03021
]
G3A56_13745 (rpoH)
Transcription machinery [BR:
roy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G3A56_13745 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QIB38926
UniProt:
A0A7L5BJF1
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All DBs
Position
M15-11:complement(2721717..2722619)
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AA seq
300 aa
AA seq
DB search
MARNSLPTITAGEAGLNRYLDEIRKFPMLEPQEEYMLGKRYAEHGDRDAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGRIQAIDDGDLKPEHVKEIATKLQVSEEEVISMNRRL
HGDASLNAPIKASEGESGQWQDWLVDDHESQEAVLIEQDELETRRRMLAKAMGVLNDRER
RIFEARRLAEDPVTLEELSSEFDISRERVRQIEVRAFEKVQEAVQKEALEAARALRVVDA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaatagtttgcctacgattacggccggcgaagccggtctcaatagatatctc
gacgaaatccgtaaatttccgatgctggagccgcaggaagaatacatgcttggcaagcgt
tacgccgagcatggtgaccgcgacgctgcccataagcttgtcaccagccacctgcgcctc
gtcgccaagattgccatgggttaccgcggttacggcctgccgattggcgaagtcgtgtcc
gaaggcaatgtcggcctgatgcaggcggtgaagaagttcgatccggaacgcggcttccgt
cttgccacctacgccatgtggtggatcaaggcctcgatccaggaatatatcctgcgctcg
tggtccctggtgaagatgggcacgacggccaaccagaagcgcctgttcttcaacctgcgc
cggctgaaaggccgtatccaggcgatcgacgatggcgatctgaagccggaacacgtcaag
gaaatcgccaccaagcttcaggtttctgaggaagaagtgatctcgatgaaccgtcgcctg
catggcgacgcatcgctgaatgcgccgatcaaggcctccgaaggcgaatccggccaatgg
caggattggctggtggatgaccatgaaagccaggaagccgtgctgatcgagcaggacgaa
ctggaaacccgccgccgcatgctggccaaggccatgggcgtgctgaacgaccgcgaacgc
cgcatcttcgaggcccgccgccttgctgaagacccggtgacgctggaagaactctcatcc
gagttcgacatcagccgcgagcgtgtgcgccagatcgaggttcgcgccttcgaaaaggtt
caggaagcggtacagaaggaagccctcgaagccgcccgcgcgctgcgcgtggtggatgcg
taa
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