Rhodopseudomonas palustris CGA009: TX73_025080
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Entry
TX73_025080 CDS
T00153
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TX73_025080 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpa03019
]
TX73_025080 (recQ)
03400 DNA repair and recombination proteins [BR:
rpa03400
]
TX73_025080 (recQ)
Enzymes [BR:
rpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TX73_025080 (recQ)
Messenger RNA biogenesis [BR:
rpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TX73_025080 (recQ)
DNA repair and recombination proteins [BR:
rpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TX73_025080 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
WCL95034
LinkDB
All DBs
Position
5449245..5451095
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AA seq
616 aa
AA seq
DB search
MIAPVSRHTDDDLDARALSVLNHVFGLPSFRGQQEAIVRHVADGGDALVLMPTGGGKSLC
YQLPALLREGCGVVVSPLIALMRDQVAGLLESGVRAAALNSTLSYDEANDIEQQLLKGEL
DLLYVAPERLLTPRCLSLLARAKISLFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPNVP
RIALTATADALTRREIAERLSLTDAPCFVSSFDRPNIRYSIVDKQNAPAQLKAFIDDRHR
GHSGVVYCLSRAKVEDIAETLSKSGLTALPYHAGLPPDVRARNQDRFLNEDGIVIVATIA
FGMGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGKPSEAWMAYGLSDIVQQRRMIDES
SGSDAFKRVSMGKLDALVGLCESTGCRRTRLLGYFGETAQHESCGNCDNCLTPPKVIDGT
VPAQKLLSCAYRTGQRFGAQHLIDVLLGRLTDRVTQFGHDKLSVFGIGGEFGEKQWRAVI
RQLVSLGHLAPDSEAFGALKLTETSRAVLKGETQVMLREQTGRPPRAKSRRGDLVGGAQR
ETSGDPALFAALKAWRSEVAKARGVPAYVVLHDATLDGLAAAKPRTLDELRGIAGIGDKK
LDHYGAALLAVIGERR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctccggtttcgcgccacaccgacgatgacctcgacgcccgggcgctgtcggtt
ctcaaccacgtgttcgggctgccgtcgttccgcggccagcaggaagcgatcgtgcggcat
gtcgccgatggtggcgatgcgctggtgttgatgccgaccggcggcggcaagtcgctgtgc
tatcagctgccggcactgctgcgcgagggctgcggcgtggtggtgtcgccgctgatcgcg
ctgatgcgcgaccaagtcgccggactgctggagagcggcgtgcgcgccgccgcactgaat
tcgacgctgtcctacgacgaagcgaacgacatcgagcagcaattgctcaaaggcgagctc
gatctgctctacgtcgcgcccgagcgactgctgacgccgcgctgcctgtcgctgttggcc
cgcgccaaaatctcgctgttcgcgatcgacgaggcgcattgcgtctcgcaatggggccac
gacttccgacccgaatatgtcgggctctcggccatcgccgagaagttccccaatgtaccg
cggatcgcgctgaccgcgaccgccgatgcgctgacccgccgggagatcgccgagcggttg
tcgctgacggacgcgccgtgcttcgtctccagcttcgaccggccgaacatccgctacagc
atcgtcgacaagcagaacgcgccggcgcagctcaaggcgttcatcgacgaccgccatcgc
ggccattccggcgtggtgtattgcctgtcgcgcgccaaggtcgaggatattgccgagacg
ctgagcaaatccggcctcaccgcgctgccatatcacgcgggcctgccgccggacgttcgc
gcccgcaatcaggaccgcttcctcaatgaggatggcatcgtgatcgtcgccaccatcgcg
ttcggcatggggatcgacaagccggacgtgcgcttcgtcgcgcatctggatctgcccaag
agcatcgaggcctattaccaggagaccgggcgcgccggccgcgacggcaagccgtccgag
gcgtggatggcttacgggctcagcgacatcgtccagcagcgccggatgatcgacgagagc
agcggctccgacgccttcaagcgggtctcgatgggcaagctggatgcgctggtgggtctc
tgcgaatccaccggctgtcgccgcacccggctgctcggctatttcggcgagacggcgcag
cacgagagctgcggcaattgcgacaactgcctcaccccgccgaaggtgatcgacggcacc
gtgccggcgcagaagctgttgtcctgcgcctaccgcaccggacagcggttcggcgcccag
cacctgatcgacgtgctgctcggccggctgaccgatcgcgtcactcaattcggccacgac
aaactgtcggttttcggtatcggtggcgagtttggcgagaaacaatggcgcgcggtgatc
cgccaactggtgtcgctcggccatctggcaccggacagcgaggcgttcggcgccttgaag
ctgaccgagacttcccgggcggtgctcaagggggaaacccaggtaatgctgcgcgagcag
accggccggccgccgcgagcaaaatcccgccgcggcgatctggtcggcggcgcccagcgc
gagaccagcggcgatccggcgctgttcgcggccctgaaggcatggcgatctgaggtggcg
aaggcccgcggcgtgccggcctatgtggtactgcacgatgccaccctcgatggccttgcg
gccgcaaagccgcggacactggacgaactgcgcgggattgctgggatcggtgacaagaag
ctcgatcattacggcgccgcgctgctggcggtgatcggcgaacggcgctag
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