KEGG   Rhodopseudomonas palustris CGA009: TX73_025080
Entry
TX73_025080       CDS       T00153                                 
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
rpa  Rhodopseudomonas palustris CGA009
Pathway
rpa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rpa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TX73_025080 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rpa03019]
    TX73_025080 (recQ)
   03400 DNA repair and recombination proteins [BR:rpa03400]
    TX73_025080 (recQ)
Enzymes [BR:rpa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TX73_025080 (recQ)
Messenger RNA biogenesis [BR:rpa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     TX73_025080 (recQ)
DNA repair and recombination proteins [BR:rpa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      TX73_025080 (recQ)
SSDB
Motif
Pfam: RQC HRDC DEAD RecQ_Zn_bind Helicase_C ResIII
Other DBs
NCBI-ProteinID: WCL95034
LinkDB
Position
5449245..5451095
AA seq 616 aa
MIAPVSRHTDDDLDARALSVLNHVFGLPSFRGQQEAIVRHVADGGDALVLMPTGGGKSLC
YQLPALLREGCGVVVSPLIALMRDQVAGLLESGVRAAALNSTLSYDEANDIEQQLLKGEL
DLLYVAPERLLTPRCLSLLARAKISLFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPNVP
RIALTATADALTRREIAERLSLTDAPCFVSSFDRPNIRYSIVDKQNAPAQLKAFIDDRHR
GHSGVVYCLSRAKVEDIAETLSKSGLTALPYHAGLPPDVRARNQDRFLNEDGIVIVATIA
FGMGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGKPSEAWMAYGLSDIVQQRRMIDES
SGSDAFKRVSMGKLDALVGLCESTGCRRTRLLGYFGETAQHESCGNCDNCLTPPKVIDGT
VPAQKLLSCAYRTGQRFGAQHLIDVLLGRLTDRVTQFGHDKLSVFGIGGEFGEKQWRAVI
RQLVSLGHLAPDSEAFGALKLTETSRAVLKGETQVMLREQTGRPPRAKSRRGDLVGGAQR
ETSGDPALFAALKAWRSEVAKARGVPAYVVLHDATLDGLAAAKPRTLDELRGIAGIGDKK
LDHYGAALLAVIGERR
NT seq 1851 nt   +upstreamnt  +downstreamnt
atgatcgctccggtttcgcgccacaccgacgatgacctcgacgcccgggcgctgtcggtt
ctcaaccacgtgttcgggctgccgtcgttccgcggccagcaggaagcgatcgtgcggcat
gtcgccgatggtggcgatgcgctggtgttgatgccgaccggcggcggcaagtcgctgtgc
tatcagctgccggcactgctgcgcgagggctgcggcgtggtggtgtcgccgctgatcgcg
ctgatgcgcgaccaagtcgccggactgctggagagcggcgtgcgcgccgccgcactgaat
tcgacgctgtcctacgacgaagcgaacgacatcgagcagcaattgctcaaaggcgagctc
gatctgctctacgtcgcgcccgagcgactgctgacgccgcgctgcctgtcgctgttggcc
cgcgccaaaatctcgctgttcgcgatcgacgaggcgcattgcgtctcgcaatggggccac
gacttccgacccgaatatgtcgggctctcggccatcgccgagaagttccccaatgtaccg
cggatcgcgctgaccgcgaccgccgatgcgctgacccgccgggagatcgccgagcggttg
tcgctgacggacgcgccgtgcttcgtctccagcttcgaccggccgaacatccgctacagc
atcgtcgacaagcagaacgcgccggcgcagctcaaggcgttcatcgacgaccgccatcgc
ggccattccggcgtggtgtattgcctgtcgcgcgccaaggtcgaggatattgccgagacg
ctgagcaaatccggcctcaccgcgctgccatatcacgcgggcctgccgccggacgttcgc
gcccgcaatcaggaccgcttcctcaatgaggatggcatcgtgatcgtcgccaccatcgcg
ttcggcatggggatcgacaagccggacgtgcgcttcgtcgcgcatctggatctgcccaag
agcatcgaggcctattaccaggagaccgggcgcgccggccgcgacggcaagccgtccgag
gcgtggatggcttacgggctcagcgacatcgtccagcagcgccggatgatcgacgagagc
agcggctccgacgccttcaagcgggtctcgatgggcaagctggatgcgctggtgggtctc
tgcgaatccaccggctgtcgccgcacccggctgctcggctatttcggcgagacggcgcag
cacgagagctgcggcaattgcgacaactgcctcaccccgccgaaggtgatcgacggcacc
gtgccggcgcagaagctgttgtcctgcgcctaccgcaccggacagcggttcggcgcccag
cacctgatcgacgtgctgctcggccggctgaccgatcgcgtcactcaattcggccacgac
aaactgtcggttttcggtatcggtggcgagtttggcgagaaacaatggcgcgcggtgatc
cgccaactggtgtcgctcggccatctggcaccggacagcgaggcgttcggcgccttgaag
ctgaccgagacttcccgggcggtgctcaagggggaaacccaggtaatgctgcgcgagcag
accggccggccgccgcgagcaaaatcccgccgcggcgatctggtcggcggcgcccagcgc
gagaccagcggcgatccggcgctgttcgcggccctgaaggcatggcgatctgaggtggcg
aaggcccgcggcgtgccggcctatgtggtactgcacgatgccaccctcgatggccttgcg
gccgcaaagccgcggacactggacgaactgcgcgggattgctgggatcggtgacaagaag
ctcgatcattacggcgccgcgctgctggcggtgatcggcgaacggcgctag

DBGET integrated database retrieval system