Rhodopseudomonas palustris HaA2: RPB_4604
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Entry
RPB_4604 CDS
T00321
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb00071
Fatty acid degradation
rpb00280
Valine, leucine and isoleucine degradation
rpb00310
Lysine degradation
rpb00362
Benzoate degradation
rpb00380
Tryptophan metabolism
rpb00410
beta-Alanine metabolism
rpb00640
Propanoate metabolism
rpb00650
Butanoate metabolism
rpb00907
Pinene, camphor and geraniol degradation
rpb00930
Caprolactam degradation
rpb01100
Metabolic pathways
rpb01110
Biosynthesis of secondary metabolites
rpb01120
Microbial metabolism in diverse environments
rpb01200
Carbon metabolism
rpb01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RPB_4604
00650 Butanoate metabolism
RPB_4604
09103 Lipid metabolism
00071 Fatty acid degradation
RPB_4604
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RPB_4604
00310 Lysine degradation
RPB_4604
00380 Tryptophan metabolism
RPB_4604
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RPB_4604
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RPB_4604
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RPB_4604
00930 Caprolactam degradation
RPB_4604
Enzymes [BR:
rpb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RPB_4604
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RPB_4604
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RPB_4604
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
DAO
UDPG_MGDP_dh_N
FAD_binding_3
NAD_binding_2
F420_oxidored
ApbA
NAD_binding_8
GIDA
Pyr_redox_2
NAD_Gly3P_dh_N
Pyr_redox
Sacchrp_dh_NADP
2-Hacid_dh_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ABD09287
UniProt:
Q2IR73
LinkDB
All DBs
Position
complement(5197662..5199878)
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AA seq
738 aa
AA seq
DB search
MTFKIFKLETDADGIALVTWDLPGKSMNVLDAATIEELGAIVEQTTKDAAVKGVVITSAK
EAFCAGADLSMLETMNRQFAQIRKDKGEEAAQQMLFDESRKLSQILRSIETSGKPWVAAI
NGLALGGGFEVTLACHYRVAADNPKSRLGLPEIKVGLFPGGGGTQRIPRIVSPQDAMTIL
LKGDQIKLDKAKAWKLVDAVVPAADLIQTAKDWIKGGGKAVAPWDEKGFKLPGGPVFSKQ
GMMMFPAGNAIYRRETYDNYPAARAIMSCVYEGLLVPMDTALRIESRYFAKVLQTKEAAA
MIRSLFLSMQELNKGARRPQGVPPTKVKKLAIIGAGFMGASVGYVSAKAGIDVVLIDRDQ
ESADKGKAHCKSVIDGLIAKGRAKPADAEALMSRITATPDYNAISDCDLVIEAVFEDRKI
KAETYAKAQPLLKEGAIFASNTSTLPINSLAEEFKDQSKFVGIHFFSPVEKMMLVEIIVG
KNTGDVALATALDYTRQINKTPIVVNDSRGFFANRCVLRFTAEGLEMLMEGIPAPMIETA
AKMAGMPVGPLSLADEVALDLVLKIMKATEADLGEQAVDQQQKKLMVEMVEKQGRFGRKN
AKGFYDYPEKGKGQKALWAGIGALQPKHVDPDTVDVEELKQRFLVVQAVEAARTVEDHVI
TDPREADVGSILGFGFAPFTGGTLSYIDFMGTKEFVALCHKLEGKYGSRFTPPKLLEDMA
KTGETFYQRFAPKKQAAA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaagatcttcaagctcgaaaccgacgccgacggcattgcgctggtgacctgg
gacctgcccggcaagtcgatgaacgtgctggacgccgcgaccatcgaggaactcggcgcg
atcgtcgagcagaccaccaaggacgccgcggtcaagggcgtggtgatcacctccgccaag
gaggcgttctgcgccggcgccgacctgtcgatgctggaaaccatgaaccggcagttcgcc
cagatccgcaaggacaagggcgaggaggccgcgcagcagatgctgttcgacgagagccgc
aagctgtcgcagatcctgcgcagcatcgagaccagcggcaagccgtgggtcgcggcgatc
aacggcctcgcgctcggcggcggcttcgaagtgacgctggcctgccactatcgcgtcgcc
gccgacaatccgaagtcgcggctcggcctgcccgagatcaaggtcggcctgttccccggc
ggcggcggcacccagcggattccgcgtatcgtctcgccgcaggacgcgatgacgatcctg
ctcaagggcgaccagatcaagctcgacaaggccaaggcctggaagctggtcgacgccgtg
gtgccggccgcggatttgatccagaccgcgaaggactggatcaagggcggcggcaaggct
gtggcgccgtgggacgagaagggcttcaagctgcccggcggtccggtgttctccaagcag
ggcatgatgatgttcccggccggcaacgcgatctatcgccgcgagacctacgacaactac
ccggccgcgcgcgcgatcatgagctgcgtctacgagggcctgctggtgccgatggatacg
gcgctgcggatcgagtcgcgctacttcgccaaggtgctgcagaccaaggaagccgcggcg
atgatccgcagcctgttcttgtcgatgcaggagctgaacaagggcgcgcgccgcccgcag
ggcgtgccgccgaccaaggtcaagaagctggccatcatcggcgccggcttcatgggcgcc
agcgtaggctacgtctcggccaaggccggcatcgacgtggtgctgatcgatcgcgatcag
gagagcgccgacaagggcaaggcgcactgcaagagcgtgatcgacggcctgattgccaag
ggccgcgccaagccggccgacgccgaagcgctgatgtcgcgcatcacggccacgccggac
tacaacgcgatctcggattgcgacctggtgatcgaggcggtgttcgaggatcgtaagatc
aaggccgagacctacgccaaggcgcaaccgctcttgaaggaaggcgcgatcttcgcctcc
aacacctcgacgctgccgatcaattcgctggccgaggagttcaaggaccagtcgaaattc
gtcggcatccacttcttctcgccggtcgagaagatgatgctggtcgaaatcatcgtcggc
aagaacaccggcgacgtcgcgctcgcgaccgcgctcgactacacccgtcagatcaacaag
accccgatcgtggtcaacgattcgcgcggcttcttcgccaaccgctgcgtgctgcgcttc
accgccgaaggcctcgagatgctgatggaaggcatcccggcgccgatgatcgagaccgcg
gcgaagatggccggcatgccggtcgggccgctgtcgctcgccgacgaggtcgcgctcgat
ctggtgctgaagatcatgaaggccaccgaggccgatctcggcgaacaggcggtcgatcag
cagcagaagaagctgatggtcgagatggtggagaagcagggccggttcggccgcaagaac
gccaagggcttctacgactatccggagaagggcaagggccagaaggcgctgtgggccggc
atcggcgcactgcagcccaagcacgtcgatccggatacggtcgacgtcgaggaactgaag
cagcgcttcttggtggtgcaggcggtcgaagccgcgcgcaccgtcgaggatcacgtcatc
accgatccgcgcgaggccgatgtcggctccatcctcggattcggcttcgcgccgttcacc
ggcggcacgctgagctacatcgacttcatgggcaccaaggagttcgtggcactgtgccac
aagctcgagggcaaatacggctcgcgcttcacgccgccgaagctgctcgaagacatggcc
aagaccggcgaaaccttctaccagcgcttcgccccgaagaagcaggccgcggcgtaa
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