Rhodopseudomonas palustris BisB5: RPD_0159
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Entry
RPD_0159 CDS
T00345
Name
(GenBank) diguanylate cyclase/phosphodiesterase
Organism
rpd
Rhodopseudomonas palustris BisB5
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_7
PAS_8
PAS_4
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ABE37399
UniProt:
Q13EU0
LinkDB
All DBs
Position
180631..182859
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AA seq
742 aa
AA seq
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MPQIRLKANKTSKRCAGAALRKRRRAVRKGPGPSTVPKRPVRAGLAAERERAVAQALAEA
RKSHERLREAIDLVPQGIVFLDSEGRYILWNKRYAEIYKASADMFKPGARFQDTLRVGIA
RGDYPEAIGREDDWIAERMQRMFHPSHSHEQILADGRCIQIEECTTSDGGVIGLRVDITE
LKQREASFRLMFDSNPVPMIVCALRDERILAVNDAAVAHYGYSSVEFAQLTLRRLQAFES
DLPWAGDHTDDERAARTWKHVKADGSLIDLAIYSRQLTYNGEPAVLLALMDITERKRAEM
RLAFMTHHDGLTGLPNRNLLRKRLDELLVHTRRASDKIAVLFIGIDHFKAVNDTLGHAIG
DKLLRGVARRLRSTLREEDLLARLNSDEFAVVQTGIRRPQEITLLAKRLLNAIAEPYLLD
GHSVVAGASIGIAVAPVDGDDSEKLLMNADMALSRAKNDSRGSFSFFEPGMDARAQARRK
IETELRTALRNEVLRPYYQPLVELSSGRISGCEALVRWPHPDRGMISPAEFIPVAEDTGL
INAIGAQVLRQACLDASRWPGDIRVAVNLSPLQFRVGNLMATVMDALKYAGLPPHRLEIE
ITETLLLEKSSQVIATLHALRALGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRDL
CNNREAQAIVRAIISLGMGLGVTITAEGVETEAELSWLRAEGCHEAQGFLFSAARPNEEI
KGLLDLQQSAAPDQQFPAARVA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaattcggctgaaggcgaacaagacctcgaaaaggtgcgcgggcgcagcgctc
cggaagcgccgccgcgccgtgcggaaaggccccggaccatcaaccgttccgaaacggccg
gtgcgcgcgggcctggccgccgagcgtgagcgcgccgtcgcgcaggcgctggccgaggcg
cgcaaatcgcatgagcggctgcgcgaggcgatcgacctcgtaccgcagggaatcgtgttt
ctcgattccgaaggccgctacattctgtggaacaagcgctatgccgagatctacaaggcc
agcgccgatatgttcaaacccggcgcgcggtttcaggacacgctccgggtcggcatcgcg
cgcggcgactatccggaggcgatcggccgcgaggacgactggatcgccgagcggatgcaa
cggatgtttcatccgagccacagccacgagcagattctcgccgacggccgctgcatccag
atcgaggaatgcaccacctccgacggcggcgtgatcggcctgcgcgtcgacatcaccgag
ctcaagcagcgcgaagcgtcgttccggctgatgttcgacagcaatccggtgccgatgatc
gtctgcgcgctgcgggacgaacgcatcctcgcggtcaacgacgctgcggtcgcgcattac
ggctattcgtccgtcgagttcgcccagctgacgctccgccgcctgcaggcgttcgagtcc
gatctgccctgggccggcgaccacaccgacgacgagcgcgcggcgcgaacctggaagcac
gtcaaggccgacggttcgctgatcgatctggcgatctattcgcggcagctcacctataac
ggcgagccggcggtgctgctggcgctgatggacatcaccgaacgcaagcgcgccgagatg
cggctggcgttcatgacccatcacgacgggctgaccgggctgccgaaccgcaatctgctg
cgcaagcggctcgacgaattgctggtccacactaggcgcgccagcgacaagatcgcggtg
ctgttcatcggcatcgaccatttcaaggcggtcaacgacacgctgggccacgcgatcggc
gacaagctgctgcgcggcgtcgcgcggcggctgcgctcgacattgcgtgaggaggacctg
ctggcgcggctcaactccgatgagttcgcggtggtgcagaccgggatcaggcggccgcag
gagatcacgctgctcgccaagcggctgttgaacgcgatcgccgagccgtatctgctcgac
ggccattcggtcgtggccggcgccagcatcggcatcgcggtcgcgccggtcgacggcgat
gattcggaaaagctgctgatgaacgccgacatggcgttgtcgcgcgccaagaacgactcg
cgcggcagcttcagctttttcgagccggggatggacgcccgcgcccaggcccgtcgcaag
atcgagaccgaactgcgcaccgcgctgcgcaacgaggtgctgcgcccgtattatcagccg
ctggtggagctctcgagcggccggatttccggctgcgaggcgctggtgcgctggccgcat
ccggatcgtggcatgatctcgccggcggaattcatcccggtcgccgaagacaccggcctg
atcaacgcgatcggcgcgcaggtgctgcgccaggcctgcctcgacgcctcgcgctggccc
ggcgacatccgggtcgcggtcaatctgtcgccgctgcagttcagggtcggcaatctgatg
gcgacggtgatggacgcgctgaaatacgccggcctgccgccgcatcggctcgaaatcgag
atcaccgagacgctgctgctggagaagagcagccaggtgatcgccacgctgcacgcgctg
cgcgcgctcggcgtccgcatctcgatggacgatttcggcaccggctattcgagcctgagc
tatctgcgtagcttcccgttcgacaagatcaagatcgatcagtcgttcgtacgcgacctg
tgcaacaatcgcgaggctcaggcgatcgtccgcgcgatcatcagcctcggcatggggctc
ggcgtcaccatcacggccgaaggcgtcgagaccgaagccgaattgagctggctgcgcgcc
gaaggctgccacgaggcgcaaggcttcctgttcagcgccgcgcggccgaacgaggagatc
aaggggctgctcgatctgcaacaatccgccgcccccgaccagcaattccccgccgcccgc
gtcgcttag
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