Rhodopseudomonas palustris BisB5: RPD_1915
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Entry
RPD_1915 CDS
T00345
Name
(GenBank) sigma-70 region 2
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
rpd
Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpd03021
]
RPD_1915
Transcription machinery [BR:
rpd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RPD_1915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
DUF134
GerE
HTH_10
HTH_Tnp_ISL3
CagY_M
TrmB
Motif
Other DBs
NCBI-ProteinID:
ABE39150
UniProt:
Q139T9
LinkDB
All DBs
Position
2152101..2152670
Genome browser
AA seq
189 aa
AA seq
DB search
MITKQATADEVLITRIACGDRAAMQVLFGRHHVRIFRFGLRLVRNEQVAEDLVSEVFLDV
WRQAGKFEGRSSVSTWLLAITRFKALSALRRRKDAELDDEAAAAIEDPSDGPELAVQKKD
TSDVLRKCLEGLSPDHREIVDLVYYHEKSVEEVANIVGIPENTVKTRLFYARKKLADLLQ
AAGVQRGWP
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtgattaccaagcaggcgactgcggacgaggttctgattacccgcattgcctgtggcgat
cgcgcggcgatgcaagtcctctttggcaggcatcatgttcggatttttcgcttcgggctg
cggctggtgcggaacgaacaggtcgcggaagaccttgtcagcgaggtgttcctcgacgtg
tggcgccaagcgggaaagttcgagggtcggtcttctgtttccacctggctgctggcgatt
acacggttcaaggcgctgtctgcgctgagacgccgcaaagacgccgaactggatgatgag
gccgccgctgcgatcgaggatccgtccgatggtccggaactggcggtacagaaaaaggac
acgagcgatgtgttgcgaaagtgcctcgagggactttcgcccgaccatcgggaaatcgtc
gatctcgtctactaccatgagaaatcggtggaggaggtcgcaaatatcgtcggaattccg
gagaataccgtgaagacccgactgttctatgcgcgcaagaaactggccgatctgctgcag
gcagccggcgtgcagcgaggctggccatga
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