Rhodopseudomonas palustris BisA53: RPE_1219
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Entry
RPE_1219 CDS
T00400
Name
(GenBank) urea amidolyase related protein
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Pathway
rpe00220
Arginine biosynthesis
rpe00791
Atrazine degradation
rpe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
RPE_1219
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
RPE_1219
Enzymes [BR:
rpe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
RPE_1219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
CT_C_D
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Biotin_lipoyl_2
Dala_Dala_lig_C
HlyD_D23
HlyD_3
DUF2118
RimK
RnfC_N
GCV_H
Motif
Other DBs
NCBI-ProteinID:
ABJ05171
UniProt:
Q07SB3
LinkDB
All DBs
Position
1375647..1379195
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AA seq
1182 aa
AA seq
DB search
MFTKVLIANRGEIASRIGRTLRRMGIASVAVYSDADRFTRAVLDADEAVRVGPAPAAESY
LNVNAIVAACLDSGAQAVHPGYGFLSENRGFAERLAEHGIAFIGPRPEHLDAFGLKHKAR
EIAANSGVPLLPGSGLLDSIDDALTEAARIGFPLMLKSTAGGGGIGMQLCHDEATLRDRF
ATVQRTARASFGDARVYLERFVAVARHIEVQIFGDGQGRVVALGERDCSLQRRNQKVVEE
TPAPGISEAMRTRLHQAAVALGQSVKYESAGTVEFIYDVEREDFYFLEVNTRLQVEHPVT
EAVFGVDLVEWMVRQAAGDSPLDAYHPRAPQGAAIEVRLYAENPNAGFRPSAGRLTHVAF
PETARIDGWIETGVEVTPFYDPMLAKIIVHAADRTQAIAKLSDALDRTSVAGIETNLDYL
RAIAAADVFHAGRVATNVLASFAFAPNSIDVLAPGAQSGLQELPGRLHLWHVGVPPSGPM
DERSFRLANAVVGNPETTAALELTVNGPTLRFNADAVVALAGARMLAKLDGIEVQHHAPI
AVHAGQTLSIGKVDGPGQRCYLAVRGGFDAPEILGSRAVFMLGAFGGHATGALKAGDVLH
IATPHALLASPRAATAQEIPPLTREWELGVIYGPHGAPDFFRDDDIATLFEASYEVHFNS
ARTGVRLIGPKPQWARADGGEAGLHPSNIHDNAYAIGSIDFTGDMPIILGPDGPSLGGFV
CPAVVARDELWKIGQLKPGDKLRFVPVARAEDPVAGPMVLRAPGELGSAIVGRHDDQEIP
VVYRRAGDDNLLVEYGPMELDIALRLRVHVLAQAVTQAQLPGLLDLTPGIRSLQIHYDST
RLSRRKLLAALTELERDLPAVDAMQVPSRIVHLPLSWNDPQAVLAMRKYQELVRPDAPWC
PSNIEFIRRINGLDDEEAVKRIVFDASYLVLGLGDVYLGAPVATPVDPRHRLVTTKYNPA
RTWTPENAVGIGGAYMCIYGMEGPGGYQLFGRTIQMWNSWRSTPEFSPGHPWLLRFFDQI
KFFPVTAEELMDARAAFPHGAYPLKIEETAFCYADYARSLARNKESIKAFKSTQQAAFEA
ERQRWKELRLDQVADDADVSEGPREEIPDGHIGVFSEVPGNVWKLAVEEGEQVESGQTLA
VIESMKMEISIAATVRGVVRLLQIKPGQTLRAGDLVCALEQV
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccaaagttctgattgccaaccgcggcgagatcgcttcgcggatcggccgcacg
ctgcgccgcatgggcatcgcctcggtcgcggtctattccgacgccgatcgattcacccgc
gcggtgctcgacgccgacgaggcggtgcgggtcggcccggcgcccgcggcggagagctat
ctcaacgtcaacgccatcgtcgcggcctgtctcgacagcggcgcgcaggcggtgcatccc
ggctacggctttctctcggagaaccgcggttttgccgagcggctggcggagcacggcatc
gccttcatcgggccgcggccggagcatctcgacgccttcggcttaaaacacaaggcgcgc
gagatcgccgcgaacagcggcgtgccgctattgccgggctcgggattgctcgactccatc
gacgacgcactgaccgaagccgcgcggatcggctttcccctgatgctgaagagcaccgcc
ggcggcggcggcatcggcatgcaactctgtcacgacgaagccacgctgcgcgaccgcttc
gccacggtgcagcgcaccgcgcgtgcttcgttcggcgatgcgcgggtgtatctggagcgc
ttcgtcgcggtggcccgccacatcgaggtgcagattttcggcgacggccaaggccgtgtc
gtcgcgctcggcgagcgcgactgctcgctgcagcggcgcaatcagaaggtagtcgaggag
accccggcgccgggcatttcggaagcgatgcgcacgcggctgcatcaggccgcggtcgcg
ctcggccaaagcgtaaaatacgaatccgccggcactgtcgagttcatctacgatgtcgag
cgcgaggatttttacttcctcgaggtcaacacccggctgcaggtcgaacatccggtcacc
gaggcggtgttcggcgtcgatctggtggaatggatggtgcggcaggccgccggcgacagc
ccgctcgacgcttatcatccgcgcgcgccgcagggcgcggcgatcgaagtgcggctctat
gccgagaatccgaatgccggttttcgtcccagcgcggggcggctcacgcatgtcgcgttt
ccggagacggcgcggatcgacggctggatcgagaccggcgtcgaggtgacgccgttctac
gatccgatgctggcgaagatcatcgtgcatgctgcggatcgcacccaggcgatcgccaag
ctgagcgatgcgcttgatcgtacgtcggtggccggcatcgagaccaatctcgattatctc
cgcgccatcgccgcagccgacgtgtttcacgccggccgcgtcgccaccaatgtgctggcc
agcttcgcattcgcgccgaacagcatcgacgtgctggcgccgggcgcgcaatccggattg
caggaactgccggggcggctgcatctgtggcatgtcggcgtgccgccgagcgggccgatg
gacgagcgctcgttccggctcgccaatgcggtggtcggcaatcccgaaaccaccgccgcg
ctcgaactcaccgtcaacggcccgacgctgcgcttcaacgccgacgccgtcgtggcgctg
gccggcgcgcggatgctggcaaagctcgacggcatcgaggttcagcatcacgcgccgatc
gctgttcacgccgggcagacgctttcgatcggcaaagtcgacggacccggccagcgttgc
tacctcgcggtgcgcggcgggttcgacgcgccggaaatattgggttcgcgcgcggtgttc
atgctcggcgcgttcggcggccacgccaccggcgcgctgaaggccggcgacgtgctgcat
atcgcgacgcctcacgcgttgcttgcgtcgccccgcgcggccacggcgcaggaaattccg
ccgctgacccgcgaatgggaattgggcgtgatctacggcccgcacggcgcgccggatttc
tttcgcgacgacgacatcgcgacgctgttcgaggccagctacgaggtgcatttcaattcg
gcgcgcaccggcgtgcggcttatcggcccaaaaccgcaatgggcgcgcgccgatggcggc
gaggccgggctgcatccctccaacatccacgacaacgcctatgcgatcggctcgatcgat
ttcaccggcgacatgccgatcattttgggtcccgatggcccgagcctcggcggcttcgtc
tgcccggcggtggtagcgcgcgatgagctatggaagatcggccagctcaagcccggcgac
aaacttcgcttcgtgccggtcgcgcgcgccgaggatccggtggcggggccgatggtgcta
cgcgcgccgggcgaactcggctcggcgatcgtcggccgccacgacgatcaggaaatcccg
gtggtttatcgccgcgccggcgacgacaatctcttggtcgaatatggcccgatggaattg
gacatcgcgctgcggctgcgggtgcatgtgctggcccaggcggtgacgcaggcgcaattg
ccggggctgctcgatctaacgcccggcatccgctcgctgcagatccactacgacagcacc
agactgtcgcgtcgcaaactgctcgcggcgctcaccgagttggagcgtgatctgccggcg
gtcgacgccatgcaggtgccgagccgcatcgtgcatctgccgctgtcgtggaacgatccg
caggcggtgctggcgatgcgcaaatatcaggaactggtgcggccggatgcgccgtggtgc
ccgtccaacatcgagttcatccgccgcatcaacggcctcgatgacgaggaggcggtgaag
cgcatcgtgttcgacgcgagctacctcgtgttgggcctcggcgacgtctatctcggcgcg
ccggtggcgacgccggtcgatccgcggcatcggctggtgaccaccaaatacaatccggcg
cggacctggacgccggaaaacgccgtcggcatcggcggcgcctatatgtgcatctacggc
atggaagggccgggcggctatcagctgttcggccgcaccatccagatgtggaattcctgg
cgttcgacgccggaattctctcccggccatccctggctgctgcggttcttcgatcagatc
aagttcttcccggtgacggcggaagaactgatggacgcgcgcgcggcgtttccgcacggc
gcctatccgctgaaaatcgaggagaccgcgttctgctatgcggactacgccaggagcctg
gcgcgcaacaaggagtcgatcaaggcgttcaaatcgacgcagcaggctgcgttcgaggcc
gagcggcagcgctggaaggaactgcggctcgatcaggtcgccgacgatgcggacgtctcg
gagggaccgcgcgaggaaattcccgacggccacatcggcgtattctccgaagtgccgggc
aatgtctggaaactcgcggtcgaagagggcgaacaggtcgagagcggacagacgctggct
gtgatcgaatcgatgaagatggaaatttcgatcgccgcgaccgtgcgcggcgtggtccgt
ctgctgcagatcaagcccggtcagaccttgcgcgccggcgatctggtctgcgcgctggag
caagtgtaa
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