Ralstonia pickettii 12D: Rpic12D_2958
Help
Entry
Rpic12D_2958 CDS
T00925
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rpic12D_2958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpf03019
]
Rpic12D_2958
03400 DNA repair and recombination proteins [BR:
rpf03400
]
Rpic12D_2958
Enzymes [BR:
rpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rpic12D_2958
Messenger RNA biogenesis [BR:
rpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Rpic12D_2958
DNA repair and recombination proteins [BR:
rpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Rpic12D_2958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACS64228
UniProt:
C6BFV9
LinkDB
All DBs
Position
1:complement(3104214..3106124)
Genome browser
AA seq
636 aa
AA seq
DB search
MYDSPAIDHALQALPEDTAAATHAVLHDVFGYSAFRGPQAEIVAHVADGGDCLVLMPTGG
GKSLCYQIPALVRHRRGQGAGIVVSPLIALMQDQVAALEEAGVRAAYLNSALTGAEAAQV
ERDLAAGRLDLVYVAPERLMTPRFLELLERSRIGLFAIDEAHCVSQWGHDFRPEYIQLSV
LHERFPHVPRIALTATADAVTRDEIVERLALTDARVFLSSFDRPNIRYTIVEKDSARQQL
LRFIRAEHMDGDTCDAGIVYCLSRKKVEETAQWLAEQGIRALPYHAGMDSQVRARHQAIF
RKEEGVVMVATIAFGMGIDKPDVRFVAHLDLPKSLEGYYQETGRAGRDGLPANAWMAYGL
ADVVQQRRMIDESDADDVHKRVSTAKLEALLGLCEAATCRRVALLAYFGESSQPCGNCDT
CLTPPQTWDATREAQMALSCAYRVQQASRVTFGAGQLIDILRGNATERVKQWHHETLSTF
GIGSDLSEAAWRSVFRQLVAQGLFAVDHGGHGALILTDAARPVLKGAQSVILRRQAEKVR
GASSSTKKERRADPAAELSTEAQVRWQALRAWRTQAAREHSVPAYVIFHDATLARIAETD
PDSREALGELPGIGMAKLDRYGQALLDVLEKCREQA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtacgactcccccgccatagaccacgcgctgcaggcgctgcccgaagacaccgccgcc
gccacgcatgcggtgctgcacgatgtgttcggctacagcgcattccgcggcccgcaggcg
gagatcgtcgcgcacgtcgccgacggcggcgattgcctggtgctgatgcccaccggcggc
ggcaaatcgctttgctatcagatacctgcactcgtgcggcaccggcgtgggcagggcgcc
ggcattgtggtttcgccgctgatcgcgttgatgcaggaccaggtggccgcgcttgaagaa
gccggcgtgcgcgccgcgtacctcaactccgcgctgacaggcgctgaggccgcgcaggtc
gagcgcgatctggcggcgggccggctggacctcgtctacgtggcgcccgagcggttgatg
acgccgcgcttcctcgagctgcttgagcgatcgcgcatcggcctgttcgccatcgacgaa
gcgcactgcgtgtcgcagtgggggcacgatttccggccggagtacatccagctttccgtg
ctgcacgagcgtttcccgcacgtgcctcgcattgcgctgaccgccacggccgacgccgtc
acgcgcgacgaaatcgtcgagcggctggcgctgacggacgcgcgcgtcttcctctcgagc
ttcgaccgcccgaacatccgctacaccatcgtcgagaaggacagcgcgcggcagcagctg
ctgcgcttcatccgggccgagcacatggacggcgacacctgcgacgccggcatcgtctat
tgcctgtcgcgcaagaaggtggaagagaccgcgcagtggctggccgagcagggcatccgc
gcgctgccgtatcacgcagggatggactcccaagtgcgtgcccgccatcaggcgatcttc
cgcaaggaggagggcgtcgtgatggtggcgaccatcgctttcggcatgggcatcgacaag
ccggacgtccgcttcgttgcgcacctcgatttgcccaagagcctggagggttactaccag
gagaccggccgcgcgggccgcgacggcctgcccgccaacgcatggatggcctacggcctg
gccgacgtggtgcagcagcgccgcatgatcgacgagtccgatgcggacgacgtgcacaag
cgcgtctccaccgccaagctcgaagcgctgctcggcctgtgcgaagccgcaacctgccgc
cgcgtggcgctgcttgcgtacttcggggaaagcagccagccctgcggcaactgcgatacg
tgcctcacgccgccgcaaacctgggatgccacgcgcgaggcgcagatggcgctgtcgtgt
gcataccgcgtgcagcaggcgagccgcgtgacctttggcgccggccagctcatcgatatc
ctgcgcggcaacgcaacggagcgcgtcaaacagtggcaccacgaaacgctctctaccttc
ggcatcggcagcgatctgtccgaagccgcgtggcgcagcgtgttccgacaactggtcgcg
caaggcctctttgcggtggaccacggcggccatggcgcgctgatcctgaccgacgcggcg
cgccccgtgctcaagggcgcgcaatcggtgatcctgcgtcgtcaggccgagaaggtgcgt
ggcgcgtcatcgtcgacgaagaaggagcgtcgcgccgatccggccgccgagctttctacc
gaagcgcaggtgcgctggcaggcgttgcgtgcctggcggacgcaggctgcgcgcgagcac
agcgtgcctgcgtatgtgatcttccacgacgccacgctggcgcgcattgccgagaccgat
cccgactcgcgtgaagcgctgggcgagcttcccggtatcggcatggccaagttggaccgc
tacggccaggcgctgctcgacgtactggagaagtgccgcgagcaagcctag
DBGET
integrated database retrieval system
