Ralstonia pickettii 12J: Rpic_2219
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Entry
Rpic_2219 CDS
T00762
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rpi
Ralstonia pickettii 12J
Pathway
rpi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rpic_2219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpi03019
]
Rpic_2219
03016 Transfer RNA biogenesis [BR:
rpi03016
]
Rpic_2219
Enzymes [BR:
rpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Rpic_2219
Messenger RNA biogenesis [BR:
rpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Rpic_2219
Transfer RNA biogenesis [BR:
rpi03016
]
Prokaryotic type
tRNA degradation factors
Rpic_2219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KhpA-B_KH
S1_2
Phage_tube
DUF5813
Motif
Other DBs
NCBI-ProteinID:
ACD27353
UniProt:
B2U7R6
LinkDB
All DBs
Position
1:complement(2328348..2330522)
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AA seq
724 aa
AA seq
DB search
MTMFNKVVKEFQWGGHKVRMETGEIARQASGAVLLDMDDTVVLATVVGAKNPKPGQDFFP
LTVDYLEKTYAAGKIPGGFFKREGRPSENETLTSRLIDRPLRPLFPEGFYNEVQVVIHVL
SINPEVPADIPALVAASAALAVSGLPFNGPVGAARVGYKDGQYLLNPNRAQLAHSDLDLV
VAGTERAVLMVESEAQQLSEEIMLGAVVYGHEQMQIAINAIHDLVRDGGKPEWDWQAAPK
NEALVAKVSELGLADLQAAYQLRQKSARSQKLKEVYKSVAAKLAEAGVEADGVEVDNILF
ELESKIVRGQILNGEPRIDGRDTRTVRPIEIRSSVLPRAHGSSLFTRGETQALVVAALGT
KSDEQIIDALQGEYRDRFMLHYNMPPFATGETGRVGSPKRREVGHGRLAKRALIPVLPPA
DEFGYTIRLVSEITESNGSSSMASVCGGSLALMDAGVPIKAHVAGVAMGLILEDNKFAVL
TDILGDEDHLGDMDFKVAGTDAGITALQMDIKVQGITKEIMQVALAQAKEGRLHILGKMQ
AAMGGARTELSEHAPRMITVKINPEKIRDVIGKGGSTIQALTKETGCTIDIGEDGTITIA
STSSEGMAEAKRRIEGITAEAEVGKIYNGTVLKLLDFGAIVNILPGKDGLLHISEIANER
VNQVSDYVKEGQAVRVKLLSTDEKGRMRLSIKAAKAEEGDVPVAAPQAPGAGDAASQQQQ
QQQQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgttcaataaggtcgtcaaagaattccaatggggcggccacaaggtccgcatg
gaaacgggtgagatcgcccgccaggcgagcggcgctgtgctgctcgacatggacgacacc
gtcgtgctcgctaccgtggtgggcgccaagaacccgaagccgggtcaggacttcttcccg
ctgactgtcgattacctcgagaagacctacgccgctggcaagatcccgggtggcttcttc
aagcgcgaaggccgtccgtcggaaaacgaaacgctgacctcgcgcctgatcgatcgcccg
ctgcgtccgctgttcccggaaggcttctacaacgaagtccaggtcgttatccacgtgctg
tcgatcaacccggaagtgccggctgacatcccggcgctggttgctgcttcggctgcactg
gctgtgtcgggtctgccgttcaacggcccggtgggcgctgcccgcgtgggttacaaggat
ggccagtacctgctgaacccgaaccgcgcacaactggcgcactcggatctggacctggtt
gttgccggtaccgagcgtgccgtgctgatggtcgaatccgaagcgcagcagctgtcggaa
gagatcatgctgggtgccgtggtgtacggccatgagcagatgcagatcgccatcaacgcg
atccacgacctggtgcgcgacggcggcaagcctgagtgggattggcaagctgcgccgaag
aacgaagcgttggtcgcaaaggtgtccgaactgggcctggccgatctgcaagctgcttac
cagctgcgccagaagtcggcccgcagccagaagttgaaggaagtctacaagtcggttgcg
gccaagctggccgaagccggcgtggaagccgatggcgtggaagtcgacaacatcctgttc
gagctcgaatcgaagatcgtgcgcggccagatcctgaatggcgaaccgcgtatcgacggc
cgcgacacccgcacggtgcgcccgatcgagatccgttcgtcggtgctgccgcgtgcgcac
ggctcgtcgctgttcacgcgtggtgaaacgcaagcgctggtggtggccgctctgggcacc
aagagcgacgagcagatcatcgacgcgctgcaaggcgagtaccgtgatcgcttcatgctc
cactacaacatgccgccgttcgccacgggcgaaactggccgcgtgggcagcccgaagcgc
cgcgaagtcggccatggccgtttggccaagcgcgcactgattccggtgctgccgcccgcc
gacgaattcggctacacgatccgtctggtgtcggaaatcaccgagtcgaatggctcgtcg
tcgatggcttcggtgtgcggcggctcgctggcactgatggacgctggcgtgcccatcaaa
gcgcacgttgctggcgtggccatgggcctgatcctggaagacaacaagttcgccgtgctg
accgacatcctgggtgacgaagatcacctgggtgacatggacttcaaggtcgctggtacc
gacgctggtatcaccgcactgcagatggacatcaaggtgcagggcatcaccaaggaaatc
atgcaggtggcactggcgcaagccaaggaaggccgtctgcacatcctgggcaagatgcag
gctgccatgggcggcgcacgcaccgagctgtcggagcacgcaccgcgcatgatcacggtc
aagatcaacccggagaagatccgcgacgtgattggcaagggtggttcgaccatccaggcg
ctgaccaaggaaaccggctgcacgatcgacatcggggaagacggcacgatcaccatcgcg
tcgacctcgtcggaaggcatggcagaagccaagcgccgcatcgaaggcatcacggcagaa
gccgaagtgggcaagatctacaacggtaccgtgctcaaactgctggacttcggcgcgatc
gtgaacatcctgccgggcaaggacggtctgctgcacatctcggaaatcgccaacgagcgc
gtgaaccaggtttccgactatgtgaaggaaggccaggctgtgcgcgtgaagctgctgagc
accgatgaaaagggtcgcatgcgcctgtcgatcaaggccgccaaggccgaagagggcgac
gtgccggtcgctgcaccgcaagcaccgggtgctggcgacgctgcctcgcaacaacagcag
caacaacagcagtaa
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