Rickettsia prowazekii Rp22: rpr22_CDS654
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Entry
rpr22_CDS654 CDS
T01977
Symbol
xth2
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rpq
Rickettsia prowazekii Rp22
Pathway
rpq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
rpr22_CDS654 (xth2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpq03400
]
rpr22_CDS654 (xth2)
Enzymes [BR:
rpq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
rpr22_CDS654 (xth2)
DNA repair and recombination proteins [BR:
rpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
rpr22_CDS654 (xth2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ADE30222
UniProt:
D5AXT3
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All DBs
Position
840508..841317
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AA seq
269 aa
AA seq
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MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETEKFPFNELSDLPYHFYVHGQK
SYNGVAIISKFPADQIIKDFQNNYCNDQARFLEIKLSSPIGYSNIISLYAPNGSFVGSNK
FVEKLKFYDNFINYLSTKKSCYEKTIIGGDFNIAPFDIDVYSKVLTETTCCTEVEQKKLR
TILNSGFEDLYRLMHPDKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLERCYMDYN
LRTQKKPSDHIPIIASFCHSLSTKSGIKY
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagctacttggaatattaactctataaaaacaagacttaatttattgcgtaac
tttttatctaaagagaatccggacattttattattacaagagataaaatgtgaaacagaa
aaatttccttttaatgaattatctgatttaccttatcatttttatgttcacggacaaaaa
tcatataatggcgttgctataatttcaaaatttccagctgatcaaatcattaaggacttt
cagaataattactgcaacgatcaagcaagattcctagaaataaaattatcatcacctata
ggatatagtaatatcatctcactctatgctcctaacggttcatttgtcggtagcaataaa
tttgtagaaaagcttaaattttatgataattttatcaattatctatctactaaaaaatct
tgttacgaaaaaactatcataggtggtgacttcaatattgcaccattcgatatagacgta
tattctaaggtactcactgaaactacttgttgtactgaggttgaacaaaaaaaattgcgt
actattcttaattctggatttgaggatttgtatagattaatgcatccggataaacaagaa
ttttcatggtgggattatagagcaggatgttttgaacaaaataaaggtatgagaattgat
atgattcttggttgtaataatacaattgactatttagaaagatgctatatggattataat
ttaaggactcaaaaaaaaccttcagatcatataccgataattgcaagtttttgccatagc
ttgtctactaaatctggcatcaaatactaa
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