Rhodopseudomonas palustris TIE-1: Rpal_1632
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Entry
Rpal_1632 CDS
T00722
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rpal_1632
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpt02000
]
Rpal_1632
Transporters [BR:
rpt02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Rpal_1632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SHIRT
Motif
Other DBs
NCBI-ProteinID:
ACF00161
UniProt:
B3Q684
LinkDB
All DBs
Position
1746281..1747834
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AA seq
517 aa
AA seq
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MRVIDFGERTLRRREVLALLGGAAATGVLGLPRQALAAKTGGILKVAAPANPSSLDPATG
GAGSDHSILWTIYDTLVEWDYDTLKPKPGLAKWSYPDPNTMVLDISEGIKFHDGTSLDAE
AVKFNLDRNRSDQRSNVKPDLSSVDSVEVTGPLQVTLKLKNPDTALPAILSDRAGMMVSP
TNIKALGNDTDRKPVGAGPWKFVRWNDNEIVVVARNENYWRKGRPFLDGIEFNIIPENAT
ALRSVVAGQNDMAFQLPARLKPVIERAKDLKLVSSPTLYCIQVYFNYARAPLDNVKVRQA
INFALDRDTFVKAALSGLGEPARMTLPSSHWAYAKDVAGTYPYDPEKAKKLLAEAGYKDG
LEMTIGGYTDQDSVRRGEVIQDQLGKVGIKLKFTRGTIAEISAQFFAQEKKFDMLVSAWT
GRPDPSMTYGLGFDKGAYYNAGRTADPELSKLIQESRASQDLNERAAVFAKIQRFTVEQA
LSAPLAFQYELDALSAKVKDFQPNLLGKPKFENISLA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatcgatttcggtgaacgcacgctgcgccgtcgcgaggttctggcgctgctc
ggtggcgctgctgcgaccggcgtgctcgggctgccgcggcaggcgctcgccgccaagacc
ggtggcattctgaaagtcgcggcgcccgctaatccgtcgtcgctcgatccggcgaccggc
ggcgccggctccgatcacagcattctgtggacgatctacgacaccctggtggagtgggac
tacgacacgttgaagccgaagccgggcctcgcgaagtggtcgtatcccgatccgaacacc
atggtgctggacatctccgagggcatcaaattccacgacggtacgtcgctcgacgccgag
gcggtgaagttcaacctcgatcgcaaccgctccgaccagcgctccaacgtcaagccggac
ctgtccagcgtcgacagcgtcgaagtcaccggcccgctgcaggtgacgctgaagctgaaa
aatcccgacacggcgctgccggcgatcttgtcggatcgcgccggcatgatggtgtcgccg
accaatatcaaggcgctcggcaacgacaccgatcggaagccggttggcgccggcccgtgg
aagttcgtgcgctggaacgataacgagatcgtcgtcgtcgcccgcaacgaaaactactgg
cgcaagggccggccattcctggacggcatcgagttcaacatcatcccggagaatgcgacc
gcgctgcgctcggtggtcgccggtcagaacgacatggcgttccaactgccggcgcggctg
aagccggtgatcgagcgcgccaaggatctcaagctggtgtcgtcgccgacgctgtattgc
atccaggtgtatttcaactacgcgcgcgctccgctcgacaacgtcaaggtacgccaggca
atcaacttcgcgctcgatcgcgacaccttcgtcaaggcggcgcttagcggccttggcgag
ccggcccggatgacgctgccgagctcccactgggcctatgccaaggacgtcgccggcacc
tatccgtatgatccggagaaggcgaagaagctgcttgccgaggccggctacaaggacggg
ctggaaatgacgatcggcggctacaccgatcaggactcggtgcggcgcggcgaggtcatt
caggatcagctcggcaaggtcggcatcaagctgaagttcacccgcggcaccatcgctgaa
atcagcgcgcagttctttgcccaggagaagaagttcgacatgctggtgtcggcctggacc
ggtcgtcccgatccgagcatgacctacgggctgggcttcgacaaaggcgcctactacaat
gccggccgcactgcggatcccgaactgtcgaagctgatccaggagagtcgtgccagccag
gatctgaacgagcgcgctgcagtgttcgccaagatccagcgattcaccgtggagcaggcg
ctgtcggcaccgctggcgttccagtacgagctcgacgcgctgtcggcgaaggtcaaggac
ttccagccgaacctgctcggcaagccgaagttcgagaacatctcgctcgcctga
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