Ralstonia pseudosolanacearum RS 476: CDC45_05395
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Entry
CDC45_05395 CDS
T05645
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpu03021
]
CDC45_05395 (rpoE)
Transcription machinery [BR:
rpu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CDC45_05395 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
AST26683
LinkDB
All DBs
Position
1108818..1109417
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AA seq
199 aa
AA seq
DB search
MSEREADQILVERVQQGDKRAFELLVVKYHRKIIRLISRLIRDAAEVEDVAQDAFIKAYR
ALPQFRGESAFYTWLYRIAVNTAKNYLATQGRRPESSTDIDTEEAETFADGEQLRDINTP
DSMLHTKQVAETVNRAMEALPEELRTAITLREIEGLSYEEIAEAMECPIGTVRSRIFRAR
EAIAEKLRPLLGTAEGKRW
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaacgcgaagccgaccagatccttgtcgaacgcgtccagcagggtgacaagcgg
gcgtttgaactgttggtggtcaagtatcaccgcaagatcatccgtctgatctcacgcctg
atccgcgatgccgcggaggtggaggatgtggcacaggatgccttcatcaaggcgtaccgt
gcgctgccccagttccggggcgaatctgcgttttatacgtggctgtaccgcatcgccgtt
aacacggccaagaattacctggcgacccagggccggcgtcccgagtcgtccaccgatatc
gacaccgaagaggctgaaacttttgccgacggtgaacaactaagggatatcaatacgccg
gactcgatgctgcacaccaagcaggttgccgaaacggtcaatcgcgcgatggaggcgttg
ccggaggaattgcgtacggcaattacgctccgcgagatcgagggtctgagctatgaggaa
atcgctgaagcgatggaatgtccgatcgggaccgtccgttcgcggatatttcgggcacgc
gaggcgattgccgagaaattgcgccccttgctgggaacagcagagggcaaacggtggtag
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