Rhodopseudomonas palustris DX-1: Rpdx1_0197
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Entry
Rpdx1_0197 CDS
T01381
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rpx
Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpx03021
]
Rpdx1_0197
Transcription machinery [BR:
rpx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Rpdx1_0197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
KORA
HTH_11
HTH_3
HTH_28
GntR
HTH_7
HTH_Crp_2
HTH_20
GP3_package
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ADU41840
UniProt:
E6VH68
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All DBs
Position
complement(223229..224128)
Genome browser
AA seq
299 aa
AA seq
DB search
MARAATLPVLNGESGLARYLAEIRKFPMLEPEQEYMLAKRWREHGDRDAAHQLVTSHLRL
VAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKKLFFNLRKAKSKISALDEGDLHPDHVKLIASRLGVTEQDVVDMNRRL
GGDASLNAPIRDDGEPGEWQDWLVDQSPSQEAVLAEHEELDQRRAALNGAIQVLNPRERR
IFEARRLADEPMTLEDLAAEFGVSRERVRQIEVRAFEKVQSAVKGTIARQEQAALEAAH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgctgctacgctcccggtccttaacggggaatccggtctcgctcgttacctt
gcggaaatccgcaagtttccgatgctcgagcccgagcaagagtacatgctcgccaagcgc
tggcgcgaacatggtgatcgcgacgccgcccatcaactcgtcaccagccaccttcgcctc
gtcgccaagatcgcgatgggctaccgcggctacggcctgccgatctccgaggtcgtctcg
gaaggcaatgtcggcctgatgcaggcggtgaagcggttcgagcccgagaagggcttccgc
ctcgccacctacgcgatgtggtggatcaaggcgtcgattcaagagtacatcctgcgttcg
tggtcgctcgtgaagatgggcaccaccgcgaaccagaagaagctgttcttcaacctgcgc
aaggcgaagagcaagatctcggcgctcgacgaaggcgatctgcatcccgatcacgtcaag
ctgatcgccagccggctcggcgtcaccgagcaggacgtcgtcgacatgaaccgccgcctc
ggcggcgacgcctcgctcaacgcgccgatccgcgacgacggcgagccgggcgaatggcag
gactggctggtcgatcaatcgccgagccaggaagcggtgcttgccgagcacgaagagctc
gaccagcgccgggccgcgctcaacggcgcgatccaggtgctcaacccgcgggaacggcgg
atcttcgaggcccgccgcctcgccgacgagccgatgacgctggaagacctcgccgccgag
ttcggcgtgtcgcgcgagcgggtgcgccagatcgaggtgcgggcgttcgagaaggtgcag
agcgccgtcaagggcaccatcgcccgccaggaacaggcggcgctggaagccgcgcactga
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