Rhodopseudomonas palustris DX-1: Rpdx1_4687
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Entry
Rpdx1_4687 CDS
T01381
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rpdx1_4687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpx03400
]
Rpdx1_4687
Enzymes [BR:
rpx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Rpdx1_4687
DNA repair and recombination proteins [BR:
rpx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rpdx1_4687
Prokaryotic type
Rpdx1_4687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ADU46234
UniProt:
E6VD51
LinkDB
All DBs
Position
complement(5039990..5041123)
Genome browser
AA seq
377 aa
AA seq
DB search
MSLAGAAPRRKQSPVITAEHDTDGDAARARPQALLAWYDRHRRSLPWRAPPGASADPYAV
WLSEIMLQQTTVRAVGPYFDKFMARWPSVTALGEASLDDVLKMWAGLGYYSRARNLHACA
VAVTRQHGGRFPDTEEGLRALPGVGPYTAAAIAAIAFSRRTMPVDGNIERVVSRLCAVED
ELPKAKPRIKALAETLLGPSRAGDSAQALMDLGATICTPKKPACALCPLMDGCAARLRGD
ADSFPRKAPKKTGALRRGAAFVVIRGDQVLVRSRPAKGLLGGMTEVPNSDWLADHDEAAA
RAQAPVLKGLSRWHRKPGVVSHVFTHFPLELTVYVAHAPGGTRAPAEMRWAAIATLADEA
LPNLMRKVIAHGLGGRP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagtctagcaggcgcggcgccgcggcggaaacaatccccggtcatcacagcagaacac
gacacggacggcgacgccgcgcgcgcccggccgcaagcgctgctggcctggtacgaccgg
catcgccgcagcctgccgtggcgggcaccgccgggcgcgagtgccgacccttacgcggtt
tggctgtccgagatcatgctgcagcagaccacggtgcgggcggtcggaccatatttcgac
aagttcatggcgcggtggccgagcgtgacggcgctgggcgaagcctcgctcgacgacgtg
ctgaagatgtgggccgggctcggctactactcgcgcgcccgcaacctgcacgcctgtgcg
gtggcggtgacgcgccagcatggcggccgctttcccgacaccgaggaggggctgcgagcg
ctgccgggcgtcgggccgtacaccgccgccgccatcgcggcgatcgcgttcagccggcgg
acgatgccggtcgacggcaatatcgagcgggtggtgtcgcggctgtgtgcggtcgaggac
gaactgccgaaggccaagccgcgcatcaaggcgctggccgagacactgctcggcccgtcc
cgcgccggcgacagcgcccaggcgctgatggatctcggcgccaccatctgcacgcccaag
aagccggcctgcgcgctgtgcccgttgatggacggctgcgcggcacggctgcgcggcgac
gccgacagcttcccgcgcaaggcgccgaagaagaccggggcgctgcgccgcggcgccgcc
ttcgtggtgatccgcggcgatcaggtgctggttcgcagccgccccgccaagggcctgctc
ggcggcatgaccgaggtgccgaattccgactggctcgccgatcacgacgaggccgccgcc
cgggcgcaggcgccggtgctgaagggcctgtcgcgctggcatcgcaaacccggcgtcgtc
agccacgtgttcacccacttcccgctggaactgacggtgtatgtcgcgcacgcgcccggc
gggacacgggccccggcggagatgcgctgggccgccatcgctacgctggcggacgaggct
ctgcccaatctgatgcgcaaggtgatcgcccacggtctcggcggccgaccgtag
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