Rubrobacter radiotolerans: RradSPS_1403
Help
Entry
RradSPS_1403 CDS
T03080
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family
KO
K02405
RNA polymerase sigma factor FliA
Organism
rrd
Rubrobacter radiotolerans
Pathway
rrd02020
Two-component system
rrd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RradSPS_1403
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RradSPS_1403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrd03021
]
RradSPS_1403
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rrd02035
]
RradSPS_1403
Transcription machinery [BR:
rrd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RradSPS_1403
Bacterial motility proteins [BR:
rrd02035
]
Flagellar system
Flagellar assembly proteins
Stator
RradSPS_1403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_37
HTH_10
KORA
Motif
Other DBs
NCBI-ProteinID:
AHY46686
UniProt:
A0A023X3C8
Structure
PDB
LinkDB
All DBs
Position
1476433..1477254
Genome browser
AA seq
273 aa
AA seq
DB search
MRVSIERLWSQYFEARAKLGSLEPDEREAAETLEKRVRGLKDRLVVNYSPLVKYAAGRVT
ARSTGAVDQEEILSWGILGLLDAVETFDAGKGAKFETYAISKIKWAILDELRRLDPLPRR
ERQRARESQRARDQLEQRLRRAPTEGEVAREMGVDERDHRSFLNRYRQAQTLSLESGAES
ESENGFELHQVIADHLYQTPHEAAEIEELRRNLVEAIKNLAERERLVTTFYFYEGLTLRE
IGKALGLTEGRISQILRQSLGKLRDSLSEPRTS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtgagggtctcgatcgaacgtctctggagccagtacttcgaggcgcgcgcgaagctgggc
tcgctcgaacccgacgagcgcgaggcggccgagacgcttgagaaacgagtaagagggctc
aaggaccgccttgtcgtcaactactcgccgctcgtgaagtacgcggccgggcgggtaacg
gcccgctcgacgggggccgtggaccaggaggagattctctcctgggggatactcgggctg
ctcgacgccgtcgagaccttcgatgccggtaaaggagccaagttcgagacgtacgcgatc
tcgaagataaagtgggcgatcctggacgagcttcgccgcctcgatccgctcccgcgccgg
gagcggcagcgcgcccgcgagtcgcagcgcgcccgggaccagctggagcagcgcctgcgg
cgcgccccgaccgagggcgaggtcgcccgggagatgggcgtggacgagcgggaccaccgg
agttttctgaaccgctaccggcaggcgcagaccctctcgcttgagtccggggccgagagc
gagtctgagaacggcttcgagcttcaccaggtcatcgccgatcatctctaccagaccccg
cacgaagccgccgagatcgaggagcttcgccggaacctcgtcgaggcgataaagaacctc
gccgagcgcgaaaggctcgttaccactttttacttctacgagggcctgaccttgagggag
ataggcaaggccctcggtctgacggagggccggataagccagatcctccgccagtcgctc
ggcaagctgcgcgactcgctctccgagcctcgcacctcctga
DBGET
integrated database retrieval system
