Rhodospirillum rubrum F11: F11_14420
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Entry
F11_14420 CDS
T02006
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rrf
Rhodospirillum rubrum F11
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rrf03009
]
F11_14420 (rimO)
Enzymes [BR:
rrf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
F11_14420 (rimO)
Ribosome biogenesis [BR:
rrf03009
]
Prokaryotic type
ribosomal protein modification factors
F11_14420 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
DUF5005
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AEO49346
LinkDB
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Position
3244402..3245727
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AA seq
441 aa
AA seq
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MNKDLQKVGIVSLGCPKALVDSERILTRLRAEGYEVSPTYDDANVVIVNTCGFLDSAKAE
SLEAIGEAMAQNGRVIVTGCMGGDEAAIRSAHPGVLAVTGPQQYERVVAAVHEAAPPAHD
PYLDLVPAEGIRLTPRHYAYLKISEGCNHGCTFCIIPDLRGKLVSRPASKVLMEAEKLAE
AGVRELLVISQDTSAYGVDLRHGESPWHGAPVKARMTELCSALGELGIWVRLHYVYPYPF
VDEIIPLMAEGKILPYLDIPFQHASPKILEAMKRPAAQDRTLERIRRWRTICPDIALRST
FIVGFPGETEDDFQQLLDWMGEAELDRVGCFKYEAVAGAKANALADAVPEEVKEERWHRF
MAAQQEISERRLAQKVGTVIEAIIDEVDEEGAIGRTKGDAPEIDGSLFLNGETSLAPGDI
VPVLIEHADEYDLWGSLAGKD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaccttcagaaggtgggcatcgtcagcctgggctgccccaaagccctggtc
gattccgaacgcatcctcacccgcctgcgggcggaaggctatgaggtgtcgcccacctat
gacgacgccaatgtggtgatcgtcaatacctgcggcttcctcgattcggccaaggccgaa
agcctggaggcgattggcgaggccatggcccagaacggccgggtgatcgtgaccggctgc
atgggcggcgacgaggccgccatccgcagcgcccatcccggcgttctggcggtcaccgga
ccccagcaatacgagcgcgtggtcgccgccgtccacgaggcggcgccgccggcccatgac
ccctatcttgatctggtgccggccgagggcatccgcttgacgccccgccattacgcctat
ctgaagatctcggaaggctgcaatcacggctgcaccttctgcatcatccccgatctgcgc
ggcaaactggtcagccgcccagcctccaaggtgctgatggaggccgagaagctggccgag
gccggggtgcgcgagttgctggtgatcagccaggacaccagcgcctatggcgtcgatctg
cgccacggcgaaagcccctggcacggcgcgccggtcaaggcccgcatgaccgagctgtgt
agcgccctgggcgaactggggatctgggtgcgtctgcactatgtctatccctatcccttc
gtcgacgagatcatcccgctgatggccgagggcaagatcctgccctatctggatatcccc
ttccagcacgccagcccgaagatccttgaggcgatgaagcgcccggccgcccaggaccgc
acgctcgagcgcatccgccgctggcggacgatctgccccgatatcgcgctgcgctcgacc
ttcatcgtcggcttccccggcgaaaccgaggacgatttccagcagttgctcgactggatg
ggcgaagccgaactcgaccgcgtcggctgcttcaaatacgaggcggtggccggggccaag
gccaatgccctggccgatgccgttcccgaagaggtcaaggaggagcgctggcaccgcttc
atggccgcccagcaggagatcagcgagcgccgtctggcccaaaaggtcggaacggtgatc
gaggcgatcatcgacgaagtcgacgaggaaggcgccatcggccggaccaagggcgacgcc
cccgagatcgacggcagcctgttcctcaacggcgaaaccagcctcgccccgggcgatatc
gtgcccgtgctcatcgagcatgccgatgaatacgacctgtggggctcccttgccggcaag
gactga
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