Rhodospirillum rubrum F11: F11_19285
Help
Entry
F11_19285 CDS
T02006
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rrf
Rhodospirillum rubrum F11
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rrf03016
]
F11_19285
Enzymes [BR:
rrf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
F11_19285
Transfer RNA biogenesis [BR:
rrf03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
F11_19285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
DUF5878
Motif
Other DBs
NCBI-ProteinID:
AEO50317
LinkDB
All DBs
Position
4318332..4319693
Genome browser
AA seq
453 aa
AA seq
DB search
MNVYDAGRMADVMAPLGYDLVSEADGADLVILNTCHIREKAAEKVFSDLGRLRPFKEAMA
AEGRRMLVAVAGCVAQAEGAELMARAKIVDMVVGPQAYHRLPEMVAKVERGAGRVLDTDF
PIEPKFDFLPAPQAHGPSAFLSVQEGCDKFCTFCVVPYTRGAEYSRPVADVLREAALLAE
GGVREITLLGQNVNAYHGEAPDGRTWGLGRLARALAEIPGVARLRYTTSHPRDVDDDLIA
AHREVAALTPFIHLPVQSGSDRILAAMNRGHDVEGYRRIIDRLRAARDDMAFSSDFIVGF
PGESERDFQATLALIDEVRFIQAYSFKYSPRPGTPAAALSAQLPEAEKSARLIALQARLV
EIQQAFNQACVGRPMDVLLDRPGRHAGQLVGRSPWMQPVHLEAPAALLGTLAPVVVETAT
SNSLAARLVEGNSSMSSDRVLAEEAPPPARIRA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttatgatgccggccgcatggccgatgtcatggcgccgctgggctatgatctc
gtttcggaggccgatggcgccgatctggtgatcctcaatacctgccatatccgcgaaaaa
gccgccgagaaggtgttttccgatcttggccgcctgcgtcccttcaaggaggcgatggcc
gccgaaggccggcgcatgctggtcgccgtcgccggatgcgtcgcccaggccgaaggcgct
gaattgatggcgcgggccaagatcgtcgatatggtcgtcgggccccaggcctatcaccgc
ctgcccgaaatggtcgccaaggtcgaacgcggcgctggccgggtgctcgataccgatttc
ccgatcgagccgaagttcgatttcctgcccgcgccccaggcccatggcccctcggccttc
ctgtcggtgcaagagggctgcgacaagttctgcaccttctgcgtcgtgccctatacgcgc
ggcgccgaatattcccgcccggtggccgatgtcctgcgcgaagccgccttgctggccgaa
ggcggggtgcgcgaaatcaccctgcttggccagaacgtcaacgcctatcacggcgaagcc
cccgatggccggacctgggggctgggccggctggcccgcgccctggccgagattcccggc
gtcgcccgtttgcgctacaccaccagccatccccgcgatgtcgatgacgatctgatcgcc
gcccaccgcgaggtcgcggccttgacgccgtttatccacctgcccgttcagtccggttcg
gaccgtattctggcggcgatgaaccgcggccatgatgttgagggctatcggcggatcatc
gaccggctgcgcgccgcccgcgatgacatggccttctcctcggatttcatcgtcggcttc
cccggcgagagcgagcgggatttccaggccaccctcgccctgatcgacgaggtgcgcttc
attcaggcttattcgttcaaatatagcccgcgaccgggaaccccggccgccgccctgtcc
gcgcaactgcccgaggccgagaaatcggcgcggctgatcgccttgcaggcccggctggtc
gagatccagcaggcgttcaatcaggcttgcgtcggccggccgatggacgttctcctcgat
cgtcccggccgccatgccggtcagctggtcggccgcagcccgtggatgcagcccgtgcat
ctcgaggcgccggcggcgctgcttggcacccttgcccccgtggtcgtcgagacggccacg
tccaacagtctggcggcgcgccttgtggaagggaactcatccatgtcctccgatcgggtt
cttgcagaggaagcgccgccgcccgcgcgcatccgggcgtga
DBGET
integrated database retrieval system
