Rhinopithecus roxellana (golden snub-nosed monkey): 104679696
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Entry
104679696 CDS
T03989
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03082
ATP-dependent chromatin remodeling
rro04714
Thermogenesis
rro05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104679696 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
104679696 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
104679696 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rro03021
]
104679696 (SMARCD1)
03036 Chromosome and associated proteins [BR:
rro03036
]
104679696 (SMARCD1)
Transcription machinery [BR:
rro03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104679696 (SMARCD1)
Chromosome and associated proteins [BR:
rro03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104679696 (SMARCD1)
PBAF complex
104679696 (SMARCD1)
GBAF(ncBAF) complex
104679696 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
104679696
NCBI-ProteinID:
XP_030794244
LinkDB
All DBs
Position
10:complement(61026143..61041978)
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AA seq
644 aa
AA seq
DB search
MPCAKMKLLLQAPLHQRARVGVETGAKAVVRPLFQVLVYLPSAWGRPLTGPLYPRVLLYG
FPSRTVKAGGRGQHAFSASRSSLGDSLAALSLPCRPAGRGNRRALGGRSGGGGSSGSGSL
CSCIGGSGKMAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRS
PMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQV
QQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEA
LKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKR
KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQ
PPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQR
MKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLST
ASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVG
NPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgccatgcgccaagatgaagctattactccaagcacctcttcatcagcgggctcgagtc
ggggttgagactggggctaaggctgtggtccgtccccttttccaggtccttgtctacctc
ccgtcggcctggggacgcccgctcacaggacctctctatcccagagttcttctctatggt
tttccctccaggaccgtgaaggcgggagggcgtggccagcacgccttttccgctagtcgc
tcctctctaggcgacagtctcgctgccctgagcctcccgtgccggccagccggccggggg
aacaggcgggcgctcggggggcgctcggggggcggggggagttccggttccggttctttg
tgcagctgcatcggcggctccgggaagatggcggcccgggcgggtttccagtctgtggct
ccgagcggcggcgccggagcctcaggaggggcgggcgcggctgctgccctgggcccgggc
ggaactcccgggcctcccgtgcgaatgggcccggctccgggtcaagggctgtaccgctcc
ccgatgcccggagcggcctatccgagaccaggtatgttgccaggcagccgaatgacacct
cagggaccttccatgggaccccctggctatggggggaacccttcagtccgacctggcctg
gcccagtcagggatggatcagtcccgcaagagacctgcccctcagcagatccagcaggtc
cagcagcaggctgtccaaaatcgaaaccacaatgcaaagaaaaagaagatggctgacaaa
attctacctcaaaggattcgtgaactggtaccagaatcccaggcctatatggatctcttg
gcttttgaaaggaaactggaccagactatcatgaggaaacgactagatatccaagaggcc
ttgaaacgtcccatcaagcaaaaacggaagctgcgaattttcatttctaacactttcaat
ccggctaagtcagatgccgaggatggggaagggacggtggcttcctgggagcttcgggta
gaaggacggctcctggaggattcagccttgtccaaatatgatgccactaaacaaaagagg
aagttctcttccttttttaagtccttggtgattgaactggacaaagacctgtatgggcca
gacaaccatctggtagaatggcacaggaccgccactacccaggagaccgatggctttcag
gtgaagcggccgggagacgtgaatgtacggtgtactgtcctgctgatgctggattaccag
cctccccagtttaaattagacccccgcctagctcggctcttgggcatccacacccagact
cgtccagtgatcatccaagcactgtggcaatatattaagacacataagctccaggaccct
catgagcgggagtttgtcatctgtgacaagtacctgcagcagatctttgagtctcagcgt
atgaagttttcagagatccctcagcggctccatgccttgcttatgccaccagaacctatc
atcattaatcatgtcatcagtgttgacccgaatgatcagaaaaagacagcttgttatgac
attgatgtagaagtggatgacaccttgaagacccagatgaattcttttctgctgtccact
gccagccaacaggagattgctactctagacaacaagatccatgagacaatagaaaccatc
aaccagctgaagactcagcgggagttcatgctgagctttgccagagaccctcagggtttc
atcaatgactggcttcagtcccagtgcagggacctcaagacaatgactgatgtggtgggt
aacccagaggaggagcgccgagctgagttctacttccagccctgggctcaggaggctgtg
tgccgatacttctactctaaggtgcagcagagacgacaagaattagagcaagccctggga
atccggaatacatag
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