Rhodococcus ruber: CS378_01350
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Entry
CS378_01350 CDS
T05142
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00061
Fatty acid biosynthesis
rrz00071
Fatty acid degradation
rrz01100
Metabolic pathways
rrz01212
Fatty acid metabolism
rrz02024
Quorum sensing
Module
rrz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CS378_01350
00071 Fatty acid degradation
CS378_01350
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CS378_01350
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rrz01004
]
CS378_01350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rrz04147
]
CS378_01350
Enzymes [BR:
rrz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CS378_01350
Lipid biosynthesis proteins [BR:
rrz01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
CS378_01350
Exosome [BR:
rrz04147
]
Exosomal proteins
Exosomal proteins of breast milk
CS378_01350
Exosomal proteins of breast cancer cells
CS378_01350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ATQ27503
LinkDB
All DBs
Position
293292..294974
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AA seq
560 aa
AA seq
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MSTARERIWLASYAEGVPSDITPPEDSLVDMLETSAARFGPRPALEFFGAELTYSQLADR
VHRGAEGLRRLGVRPGDRVALVLPNCPEHVIAFYAVLRIGGVVVEHNPLYTEEEMARQFA
DHGATVAIAWDKVCPLLQQIAGDTAVEHIVAVDITRSMPWSKRLALALPVPKARAARDTL
TGSAPGTIPWKRLLADGPVDPDRPGPSVEDLAVIQYTSGTTGVPKGAMLTHRNLGANAAQ
GRAWVPGLVDGEEVVYAVLPMFHAYGLTLCVTFAMSIGARLVLFPKFDVDLVLTAAAKHP
PTFMPAVPPIYERLARAARERSVDLTSARWSISGAMPLPTETLELWEEVTGGVLVEGYGL
TETSPVAIGNPIGLTRRPGAVGVPFPSTEIRVVDPADPARDVEPGERGELLLRGPQVFSG
YWNKPEQTAEALLDGGWFRTGDIVQVDRDGFVTVVDRIKELVITGGFNVMPSEVEAALRS
FPGIVDAAVVGLPASDGGEDVVAAVLVSGEDVDPEAAREHCRSRLAAYKVPRRVVVVEDL
PRSQIGKVLRRQVRESLLPG
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgctagggaacggatctggctcgccagctacgccgagggcgtgccctcggac
atcacgcccccggaggactcgctggtcgacatgctcgagacttcggcagcccggttcgga
ccacgtccggcgctcgagttcttcggcgcggaactgacctattcgcaactcgccgaccgg
gtgcaccgcggcgcggaggggctacggcggctcggtgtgcgccccggtgaccgggtggcg
ctcgtcctgccgaactgcccggaacatgtgatcgcgttctatgcggtcctgcggatcggc
ggcgtggtggtcgagcacaatccgctctacaccgaggaagagatggcccgccagttcgcc
gaccacggcgccacggtggcgatcgcctgggacaaggtctgtccgctgctgcagcagatc
gccggggacacggccgtcgagcacatcgtggcggtggacatcacgcgttcgatgccgtgg
tccaagcggctcgcgctcgcccttcccgttccgaaagcgcgtgcggcgcgggacacgctg
accggctctgcgcccgggacgattccgtggaaacggctgctggcggacgggcccgtcgac
cccgatcgaccggggccctcggtcgaggatctggcggtgatccagtacacgagcggcacc
accggcgtcccgaagggcgcgatgctgacccaccgcaacctcggcgccaacgccgcccag
ggtcgtgcgtgggtaccgggcctggtggacggcgaagaggtcgtgtacgcggtgttgccg
atgttccacgcatacgggctcacgctgtgcgtgaccttcgcgatgagtatcggcgcccgg
ctggtcctgttccccaagttcgacgtggatctggtgctcaccgccgccgcgaagcacccg
cccacgttcatgccggcggtgccgccgatctacgagcggctcgcccgcgcggcccgggag
cgatcggtggacctgacgtcggcgcgatggtcgatctccggggcgatgcccttgccgacg
gagaccctggaactgtgggaggaggtcaccggcggggtactggtcgaggggtacgggctc
accgagacgtcgccggtggcgatcggcaatcccatcggactcacccgccggcccggcgcc
gtcggggtgcccttcccgagcaccgagatccgggtggtcgatcctgccgacccggcgcgc
gacgtcgaacccggggagcggggagaattgctgctccggggtccgcaggtgttctccgga
tactggaacaagcccgaacagacggcggaagcactgctcgacgggggctggttccggacc
ggggacatcgtccaggtcgaccgggacggattcgtcacggtggtggatcggatcaaggaa
ctggtcatcaccggtggattcaatgtcatgccgtccgaggtcgaggcggcgttgcggtcg
ttcccggggatcgtcgatgccgccgtggtgggactgccggcttccgacggcggcgaggac
gtggtggcggcggtgctggtttcgggtgaggacgtcgaccccgaggcggcgcgggagcac
tgccggtcgcgcctggccgcctacaaggttccgcgacgtgtggtggtggtggaggacctg
ccgcgctcccagatcgggaaggtgctgcgccggcaggtccgcgagtctctcctccccggc
tga
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