Ralstonia solanacearum CFBP2957: RCFBP_10424
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Entry
RCFBP_10424 CDS
T01272
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rsc
Ralstonia solanacearum CFBP2957
Pathway
rsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RCFBP_10424 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsc03019
]
RCFBP_10424 (recQ)
03400 DNA repair and recombination proteins [BR:
rsc03400
]
RCFBP_10424 (recQ)
Enzymes [BR:
rsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCFBP_10424 (recQ)
Messenger RNA biogenesis [BR:
rsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RCFBP_10424 (recQ)
DNA repair and recombination proteins [BR:
rsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RCFBP_10424 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
CBJ41731
LinkDB
All DBs
Position
451339..453252
Genome browser
AA seq
637 aa
AA seq
DB search
MFDSPAIDHALDALPEDTAAATRAVLHDVFGYSAFRGPQADIVTHVADGGDCLVLMPTGG
GKSLCYQIPALVRHRRGQGAGIVVSPLIALMQDQVAALEEAGVRAAYLNSALTGAEAARV
ERDLAAGRLDLVYVAPERLMTPRFLELLERSRIGLFAIDEAHCVSQWGHDFRPEYIQLSV
LHERFPHVPRIALTATADAVTRDEIVERLALGGERVFLSSFDRPNIRYTIVEKDSARQQL
LRFIRAEHLGEDGCDAGIVYCLSRKKVEETAQWLAEQGIRALPYHAGMDVETRARHQAIF
RKEEGVVMVATIAFGMGIDKPDVRFVAHLDLPKSLEGYYQETGRAGRDGLPANAWMAYGL
ADVVQQRRMIDESDADDVHKRVSTAKLDALLGLCESAGCRRVALLAYFGESSQPCGNCDT
CLSPPQTWDATREAQMALSCVYRVQQASRVSFGAGQLIDILRGNATERVKQWHHETLSTF
GVGNTLSEAAWRGVFRQLVAQGLLAVDHGGHGALVLTDAARPVLKGEHCVTLRRQAEKVR
AATASGTKTERRADPAADLSAEAQVRWQALRVWRAQTAREHSVPAYVIFHDSTLARIAES
DPASREALAELPGIGVAKLDRYGQALLDVLAKCRGES
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattcccccgccattgaccacgcgctcgacgcgttgcccgaagacacggccgcc
gccacgcgcgccgtgctgcacgacgtgttcggctacagcgcgttccgcgggccgcaggcg
gacatcgtcacgcatgtcgccgacggcggcgattgcctggtgctgatgcccaccggcggc
ggcaagtcgctgtgctaccagattcccgccctggtgcggcaccggcgcggccagggcgca
ggcatcgtggtctcgcccctgatcgccctgatgcaggaccaggtggccgcgctggaagag
gcgggcgtgcgcgccgcctacctgaactccgcgctgaccggcgccgaggccgcgcgggtc
gagcgcgatctggcggccggccggctcgatctcgtctatgtcgcgcccgagcggctgatg
acgccgcgcttcctcgagctgctggagcgctcgcgcatcggcctgttcgccatcgacgag
gcgcattgcgtgtcgcagtggggacacgatttccggccggagtacatccagctctccgtg
ctgcacgagcgtttcccgcacgtgccccgcatcgcgctgaccgccaccgccgatgccgtc
acgcgcgacgagatcgtcgagcggctggcgctgggcggcgagcgcgtcttcctctccagc
tttgaccgccccaacatccgctacaccatcgtcgagaaggacagcgcgcgccagcaactg
ctgcgcttcatccgcgccgagcacctcggcgaggacggttgcgatgccggcatcgtctat
tgcctgtcgcgcaagaaggtggaagagaccgcgcagtggctggccgagcagggcatccgt
gcgctgccgtaccacgccggcatggacgtcgagacgcgcgcgcgccaccaggccatcttc
cgcaaggaagagggcgtggtgatggtggcgaccatcgccttcggcatgggcatcgacaag
ccggacgtgcgcttcgtcgcccacctggacttgcccaagagcctggagggctactaccag
gaaaccggccgcgccggccgcgatggtctgcccgccaacgcctggatggcctacggcttg
gccgatgtggtgcagcagcgccgcatgatcgacgagtccgacgccgacgacgtgcacaag
cgcgtctccacggccaagctcgatgcgctgctggggctgtgcgaatcggccgggtgccgg
cgcgtggcgctgttggcgtacttcggcgagtccagccagccgtgcggcaactgcgacacc
tgcctgagcccgccgcagacctgggatgccacccgcgaggcgcagatggcgctgtcgtgc
gtgtaccgggtgcagcaggccagccgcgtgagcttcggcgccggccaactgatcgacatc
ctgcgcggcaacgccaccgagcgcgtcaagcagtggcatcacgagacgctgtccaccttc
ggcgtcggcaacaccctgtccgaggccgcctggcgtggcgtgttccgccaattggtggcg
cagggcctgctggcggtcgatcacggcggccatggcgcgctggtgctgaccgacgccgcg
cgccccgtgctcaagggcgagcactgcgtgaccctgcggcgccaggccgagaaggtgcgc
gccgcaaccgcgtccggcaccaagaccgagcgccgcgcggaccccgccgccgacctgtcg
gccgaggcccaagtgcgctggcaggcgctgcgcgtctggcgggcccagaccgcgcgcgag
cacagcgtgcccgcctatgtgatcttccatgacagcacgctcgctcgcatcgccgaatcc
gatcccgcttcgcgcgaggcgctggccgagctgcccggcatcggcgtcgccaagctggac
cgctacggccaggccttgctcgacgtactggcgaagtgccggggtgaaagctaa
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