Ralstonia solanacearum CFBP2957: RCFBP_20079
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Entry
RCFBP_20079 CDS
T01272
Name
(GenBank) Putative type III effector protein, SspH1 family
Organism
rsc
Ralstonia solanacearum CFBP2957
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NEL
Phage_lysis
Motif
Other DBs
NCBI-ProteinID:
CBJ43273
LinkDB
All DBs
Position
complement(2043198..2045234)
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AA seq
678 aa
AA seq
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MPSRVPSASVGQSHHAVGTASTSASSSASQPATSTAPAARRRDPQFGELLQLQRQNNAPR
VSAANVRTAQVGTWSVERAINDMAGRLPDRRTRWLKKSASPQYLYAKELTAGQRGQLERA
LERRFRNPAATVEHRDAALTMWLSVQQARLRTHTSGHRNHHNAEQFETAVLSVPIPLMAL
AYRTQRRRYYSSPLRPEYRAAFNNFMRVIGDPSLSQATRQQVAAQLEYHWRSEETIARHE
RAQLEQQGVMGLAESGYQVSEDFEHARLTALERQAVIQQAGRGVPSALYLQALETEQQRA
QPGSIRAESLARQLASVHAAANAPAGASTSAQPSGSNDDAAARLRRATADDIQRLRRPLG
SEIKAWLKLAGGKSLPDAKAFDREADAEAFARLLERRRPRSLIPFLASRDPVVAEGAMVI
RAIAKDADLRKNVFSAAETALGSCGDNVAEGFSNIVTMVDTHELVARVRSGEIDQPKLES
WARQRYRLDSLIAEVNQMTARSRNHEGRAGTVIDRQLEREPVETMLHAKVALKKELDLPK
NIPSRMMHPLASVLGKATLKRLAETVRAKEADPAGLAKYLLSNDAWRTAMQTLHSAAFTQ
LKNRFAPEKAALAEEAPPQPTDAEGLEFLEERVAYAERTQVFTQKVRAAEDRLLLRLSGR
DELVPVVVAGAGPSQGSH
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgcgcgttccttccgcctcggttggccaatcccatcacgcggtgggaacggct
tcgacatcggcgtcgtcctcagcctcccagccggcgacttccacggcgcccgccgcgcgc
cggcgagacccgcagttcggtgaactgctccagctccagcgtcagaacaacgcaccgcgt
gtcagcgcggcgaacgtgcgcaccgcccaggtgggcacgtggagcgtcgagcgtgcgatc
aacgacatggccgggcgtttgccggatcggcgcacgcgatggctcaagaaatccgcctcg
ccgcagtacctgtacgccaaggaactgacggcaggccagcgcgggcaactggagcgggcg
ctggagcgccggtttcgcaatccggccgccaccgtcgaacacagggatgccgcgctgacc
atgtggctgtcggtccagcaggcacggctgcgcacgcataccagcgggcatcgaaatcac
cataacgctgaacagtttgaaacggcggtcttgagcgttccgatcccgctgatggcattg
gcttaccgcacgcagcggcggcgatactattcctctccgctgcggccggaataccgcgcc
gcattcaacaacttcatgcgcgtcatcggagacccctcgctgagccaagcgactcgccag
caggtcgcggcgcagctcgagtaccactggcgcagcgaagagaccatcgcccggcatgaa
cgcgcccagctcgaacagcagggcgtgatggggctggccgaaagcgggtaccaggtcagc
gaggacttcgaacacgccaggctgaccgcgctggagcggcaggccgtgatccagcaggcg
ggacgcggcgtcccctcggcgctgtatctccaagcgctggaaacggagcagcaacgcgcc
cagccgggttcgatccgggcggagtcgctggccaggcaactggcatccgtgcacgcggcg
gcaaacgcaccggcgggggcctccacctcggcacagccgagcgggtccaacgacgatgct
gcggcacgcctgcgacgggcgactgccgacgacatccagcgactgcggcgcccgcttggg
tcggagatcaaggcgtggctcaagcttgcggggggcaagtctttgccggacgccaaggcc
ttcgatcgcgaagcggatgccgaggcgtttgcgcgtctgctggagcgccgccggccgagg
agcctgatccccttccttgccagccgcgatccggttgtcgccgagggggcgatggtcatc
cgggccattgcgaaggacgccgatctgcgcaagaacgtgttcagcgcggcggagaccgcc
ttgggaagctgtggcgacaacgtggccgaagggttctccaacatcgtgacgatggttgat
acgcacgagctggtggcgagggtgcgcagcggcgagatcgatcagccgaagctggagtcc
tgggcacgccagcgatatcgtttggacagcctgatcgcggaagtcaaccagatgacggcg
cgcagtcgaaaccacgaggggcgtgccggcaccgtgatcgataggcagttggagagagag
ccggtggaaacgatgctccatgcgaaagtcgcattgaagaaggagctcgacctgcccaag
aacatcccgtcccgcatgatgcacccgctcgccagcgtgctcggcaaggcgactctcaag
aggctggccgaaaccgtgcgggccaaggaagccgatccggccgggttggccaagtacctg
ctcagcaatgacgcgtggcgcaccgccatgcagacgctgcactccgctgcgttcacccaa
ctcaagaaccgctttgccccggaaaaggccgccctcgcagaggaggcgccgccccagccc
acggatgccgaggggctggaattcctggaggaacgggtcgcttacgcggagcggacccag
gtgtttacgcagaaggtccgggcggccgaggataggctcctgctgaggctctcagggcgc
gatgagctcgtgccggtggtggtcgccggcgcagggccgtcgcaaggcagccattag
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