Cereibacter sphaeroides ATCC 17029: Rsph17029_1055
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Entry
Rsph17029_1055 CDS
T00484
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsh03016
]
Rsph17029_1055
Enzymes [BR:
rsh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Rsph17029_1055
Transfer RNA biogenesis [BR:
rsh03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Rsph17029_1055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ABN76166
UniProt:
A3PIK0
LinkDB
All DBs
Position
1:1086529..1087083
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AA seq
184 aa
AA seq
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MIRAFVALDLPAEVRSALAVQQFLLPLPRKIEPESFHLTLLFLGEVPETVLEAAHEEFET
IVRPPFGLEVAGLGLFGGERPRAVWAGLRPSDPLARLQARIERAARVAGIEPERRRFVPH
VTLGRFAPPPPEERFRLERAVAEGASFRGGAFEVTRFFLYRSHLGPKGARYEELASYPLR
GGAP
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgccttcgtcgccctcgacctgcccgccgaggtgcgctcggctctggccgtc
cagcagttcctgctgccgctgccgcgcaagatcgagcccgagagcttccatctgacgctc
ctctttctgggcgaggtgcccgagacggtgctcgaagcggcccacgaggagttcgagacc
atcgtccggccgccgttcgggctggaggtggcggggctcgggctgttcggcggcgagcgg
ccccgcgccgtctgggcgggcctccggccctcggacccgctcgcgcgcctgcaggccagg
atcgagcgcgcggcgcgggttgcggggatcgagcccgagcggcggcgcttcgtgccccat
gtcaccttgggccgcttcgcgccgccgccccccgaggagcgcttccgccttgagcgggcg
gtggcggagggtgcctccttccgcggcggcgccttcgaggtcacgcgcttcttcctctac
cgctcgcatctggggccgaagggggcgcgctacgaggagctcgcctcctatccgctgcgc
gggggcgctccttag
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integrated database retrieval system
