Runella slithyformis: Runsl_2017
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Entry
Runsl_2017 CDS
T01553
Name
(GenBank) TonB-dependent receptor
Organism
rsi
Runella slithyformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
CarbopepD_reg_2
CarboxypepD_reg
Plug
EMC7_beta-sandw
PEGA
fn3_3
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
AEI48433
UniProt:
A0A7U4E5Q0
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Position
2318986..2321781
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AA seq
931 aa
AA seq
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MNRLLLFIAFIFSAAFTFAQSGTIRGTIIDAKNKETLIGATVKLTGTQLGAATDVNGFFS
IAKVPAGKYTLEITYVSYKTENIQNVSVEAEKVTEINTSLLEEAATLQEVRIVATRQTNT
EVSVISEIKAAQNIVSGISSQQIARTLDRDAAQVVKRVPGITIVGDRFITIRGLNQRYNN
VMLHNAFTPSMETDVKAFSFDVIPSGQIDRLLIYKTPSADLPGEFAGGIVKIFTKSIPDQ
NSVVLDYSVGLRRGTSFNEFKASKQGENYWTGFNNGYLDLPKSFPKDLRAVGNNPALIEL
AGRSLRNQWVPISSTASPDQRLSLTGNFKMKLGNVQIGNITAVNYSETRLYTDTQRNDYN
IGANNQIETLFEYDDKAYSRNNRVGILHNWAARFNSNHSIEFKNLFNQLSNGRYVFRSGQ
DIAQNYRPNNHSFDQVYRGIYSGQLTGKHEFNDDKTTVDWVVGYNNSYRDQPDYKRYRSD
VIDPTTGKTEIYIPVGQAQAYFLGRFNAKMKENGYTGAANLTQKVTVGEREIEFKAGGFY
ELKDRTFKARNLGYVRGGNFNPAFAGGDINLLFQNIRNDGGIRIDEQTNPNDSYTSKNTL
VAGYGLINMPFTKKFNAIVGVRVENNRQQMNSAYLGGAAAKVDNTITSVLPSANLTYNFT
EKTLLRAAYGMTVNRPEFRELAPFSFFDFDFNVVYEGNPNLKIATVQNMDLRWEHYPTPS
ELISVAAFYKYFDTPIESTVDLGSTGLGSKTFITNNAASAFSTGIEIELKKGLGSLLPGS
RILEKTSLLFNTALIHSRVSLGARGVGQSDNRPLQGQSPYIVNVGINYNDPKKDLQVNLL
YNVIGRRIIAVGFEAYPDLYEMPRNVVDLTFSKGLGQRWTLKGGVQDLLNQPWRIMQDSN
KDNKFESGTDFFVQKYRTGQLVSLGFSYRLL
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgaacagattactactgtttattgcctttatcttctctgctgccttcacctttgcccag
tcgggtaccattcgcggtacgatcatcgatgccaagaataaagaaaccctgattggtgcc
actgtaaagctgaccggaactcaactgggagccgcaaccgacgtaaacggttttttttcc
attgccaaggttcctgcgggaaagtacacgcttgaaatcacttatgtatcttataaaacg
gaaaacattcagaatgtgtctgttgaggcggaaaaagtgacggaaataaatacgtcactt
ctggaagaagccgctacattgcaggaggtaaggatcgtagccacgcgccaaaccaatacc
gaggtgtcggtcatcagcgagatcaaagctgctcaaaatatcgtgagcgggatttcgtcg
cagcaaatcgcacgtacccttgaccgcgacgctgctcaggtagtcaaacgcgtgccgggc
attaccatcgtgggcgaccgattcattacgattcgcggtctgaaccagcgttataacaat
gtaatgttgcacaatgcttttacaccttcgatggaaacagacgtaaaagcattttccttt
gatgtgattccgagcggacaaattgatcgtttattgatttataaaacgccatccgctgat
ttgccgggtgagtttgcgggagggattgtgaagatatttaccaaaagcattcccgatcaa
aacagcgtagtgctggattacagtgtaggtttgcgccggggaacgagttttaacgaattc
aaagcctcgaagcagggcgaaaattattggaccggttttaacaatggctatttagatctt
cccaaaagctttccgaaagacctgcgggcggtgggcaataatcccgctttgatcgaattg
gccggccgttcgttacgtaatcagtgggtaccgataagctccaccgcttctcccgaccag
cggttgtcattgaccggaaattttaaaatgaaactgggcaatgttcagatcggcaacatt
acggcggtcaattacagcgaaacgcgcttatatacagatacccaacgcaatgactataac
atcggcgcaaataatcagatcgagaccttatttgaatacgatgataaggcctactcgcgc
aataaccgcgtaggaattctgcacaactgggcggcacgcttcaacagcaaccattcgatc
gaattcaagaacctctttaaccaattgagcaacgggcgctacgtcttccgctcaggtcag
gatattgcccaaaattaccgccccaacaaccactcttttgatcaggtctatcgcggaatt
tactccggacaattgacaggaaagcatgagttcaatgacgataaaacgaccgttgattgg
gtagtgggttataataattcctaccgcgatcagccggattataagcgttatcgttcggat
gtaatcgaccctaccacgggcaaaaccgaaatttacattccggtaggtcaggcacaggcg
tattttctgggacgtttcaatgctaaaatgaaggagaacggctacacaggcgcggccaat
ctgacgcaaaaagtgaccgtcggcgaacgggagatcgaattcaaagccggtggcttttat
gaactgaaagaccgtacgttcaaggcccgcaacttaggctatgtgcgcggcggcaatttc
aacccggcttttgcgggcggtgacatcaatcttttattccaaaacattcgcaacgacggc
ggcattcgcattgatgagcaaaccaatcctaacgattcctacacgtccaaaaatacgctg
gttgccggttatggtttgatcaatatgccctttacgaagaaattcaacgccattgtgggg
gtacgggtggagaacaaccgccagcaaatgaacagtgcgtatttgggaggcgctgccgct
aaagtggacaataccatcaccagcgtgcttccctcggccaacctgacgtataattttacc
gaaaaaaccttgttgcgggctgcgtacggcatgaccgtaaaccgccctgaatttcgggaa
ctggctcctttttccttctttgattttgacttcaacgtggtgtacgaaggaaatcccaat
ttgaagatcgcgaccgttcagaacatggacctgcgctgggagcattatcccactccttct
gaactcatcagcgtggccgctttttataagtactttgatactcctatcgaatcaacggtc
gacttaggctccacaggattaggttccaagactttcattaccaacaacgccgcaagtgct
ttcagtaccggaattgaaattgagctcaaaaaaggcctcggctcattgctgcccgggtca
cggattctcgaaaaaacaagcttactgttcaatacagccctgattcacagccgtgtcagt
ttgggtgcacggggcgttggccagtcagataaccgtccgttgcaggggcagtcgccttac
atcgtcaatgtgggtatcaactacaacgatcccaaaaaagacctccaggtcaatttgctc
tacaacgtcattggccgtcgcatcatcgcggtagggtttgaagcctatccggacttgtat
gagatgccgcgtaacgtggtagacttaacgttctcaaaaggcttgggacagcgctggacg
ctcaaaggcggagttcaggatctcctgaatcagccctggcggatcatgcaggactccaac
aaagacaataagtttgagtcgggcactgatttcttcgttcaaaaataccgtacaggtcaa
ttggtcagcctgggattctcgtaccgattattgtaa
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