Cereibacter sphaeroides KD131: RSKD131_3492
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Entry
RSKD131_3492 CDS
T00844
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rsk
Cereibacter sphaeroides KD131
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsk03000
]
RSKD131_3492
Transcription factors [BR:
rsk03000
]
Prokaryotic type
Helix-turn-helix
Other families
RSKD131_3492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
HTH_8
AAA_5
Sigma54_activ_2
HTH_23
HTH_29
HTH_28
IclR
HTH_1
HTH_30
HTH_IclR
MarR_2
HTH_38
HTH_17
Sigma70_r4
RWP-RK
HTH_Tnp_ISL3
HTH_20
MerR
HTH_11
HTH_24
AAA_16
Xre-like-HTH
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ACM03352
UniProt:
B9KTH4
LinkDB
All DBs
Position
2:complement(408412..410247)
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AA seq
611 aa
AA seq
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MEHELSHVREIEAAAEGRPPGRDRVVVESWLRCLNQHRLDPTARSEAFILPETALREHRQ
RSEALIAIARSGIESLYGLVAGQNYVLLLADRAGVTVEYLGDEAQKQELRRSGLYMGAEW
SEARAGTCALGACIETGEPLVIHQSDHFDATHTGLSCTAAPIYDTLGRLSAVLDISLLSS
PRAKASQSLALKLVTAAARRIEMANLMAENRREWVLRLSASPDFLDVDPEAALSLDGTGR
VLGLTHGAARILAQAAGQDWRAAGGLIGRPVSDFLNVRVDRLDDLMRQRPAAERFIETRD
GHRLFAHAIEPRRAPARTVPAPVSLPPPLRGLAGDDPAMAALLRAAAALALQRLPILIEG
ETGTGKLTLARAIHAAGRGGPFTVVRCAEIGEEEALFFGRQTGRRQEEGLIAAAHRGTLV
LDKIEDLPPRTQARLLRLAAEGSYLPVGGLRPVPVDVRILSTALPGGAEGLRPDLLHRLG
GAWLRLPPLRARQDRLWLAERLLGSGDRPLSLAPEALAVLASHPWPGNLRELEHMAQTLR
ALVPGAEVGLADLPETIRAGTASGPGVPQAAGAVLAQVLRQTGGNVSEAARRLGVNRSTI
HRQIRRMGVTR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgagctcagccatgtgcgcgagatcgaggctgcggccgaagggcggccgccc
gggcgcgaccgggtggtggtcgaaagctggctccgctgcctgaaccagcatcggctcgat
ccgaccgcccggtccgaggccttcatcctgccggagacggcgctgcgcgagcatcgccag
cggtccgaggcgctgatcgccatcgcccggtcggggatcgagagcctctacgggctggtt
gcggggcagaattacgtcctgctgcttgcggaccgggccggggtgacggtggaatatctg
ggcgacgaggcgcagaagcaggaactgcgccggagcggtctctatatgggcgccgaatgg
tccgaggcgcgcgcgggcacctgcgcgctcggcgcctgcatcgagacgggcgagccgctg
gtgatccaccagagcgatcatttcgacgcgacgcacaccggcctctcctgcaccgccgcg
ccgatctacgacacgctcggccggctctcggcggtgctcgacatctcgcttctctcctcg
ccgcgcgcgaaggcgagtcagtcgctcgcgctgaagctggtgacggcggcggcgcggcgg
atcgagatggccaacctgatggccgagaaccggcgcgaatgggtgctccggctctcggcc
tcgccggatttcctcgatgtggatcccgaggcggcgctttcgctcgacgggacggggcgg
gtgctagggctgacccatggcgccgcgcggatcctcgcgcaggcggcggggcaggactgg
cgcgcggcgggcgggctgatcgggcggccggtctccgatttcctgaacgtgcgggtggac
cggctcgacgatctcatgcgccagcgccccgcagccgagcggttcatcgagacgcgcgat
ggccatcggctctttgcccatgcgatcgagccgcgccgcgcgcctgcccggacggtgccc
gcgccggtgagcctgccgccgccgctgcgaggccttgccggcgacgatcccgcgatggcc
gcgctcctgcgggcggccgcggcccttgcgctgcagcggctgccgatcctgatcgagggc
gagaccggcacgggcaagctcacgctcgcccgcgcgatccatgcggcggggcgcggcggg
cccttcacggtggtgcgctgcgccgagatcggcgaggaggaggcgctgttcttcggccgc
cagaccgggcggcggcaggaggaggggctgatcgcggccgcccatcgcggcacgctcgtc
ctcgacaagatcgaggatctgccgccccgcacgcaggcgcgccttctgcgcctcgcggcc
gagggcagctacctgccggtgggcggcctgcgcccggtgccggtcgacgtgcgcatcctt
tcgaccgcgctgccgggcggggccgaggggctgcggcccgacctcctgcaccggctgggc
ggggcgtggctgcggctgccgccgctgcgggcgcgacaggaccggctgtggctggccgaa
cggctgctcggctcgggcgaccggccgctctcgcttgcgcccgaggcgctggcggtgctg
gcctcgcatccctggcccggcaatctgcgcgaactcgagcatatggcgcagacgctgcgg
gccctggtgccgggcgctgaggtcggcctcgccgacctgccggagacgatccgagcgggg
accgcgtccggcccaggcgtcccgcaggcggcaggggcggtgctggctcaggtgctgcgc
cagaccgggggcaatgtctccgaagccgcgcgacggctgggcgtcaatcgctcgacaatt
catcgccagatccgccgaatgggcgtgacacgctga
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