Ralstonia solanacearum PSI07: RPSI07_0256
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Entry
RPSI07_0256 CDS
T01273
Name
(GenBank) Bacteriophage-related protein, tape measure domain
Organism
rsl
Ralstonia solanacearum PSI07
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMP_3
RIG-I_C
CoV_S2
Motif
Other DBs
NCBI-ProteinID:
CBJ49634
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All DBs
Position
247318..251418
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AA seq
1366 aa
AA seq
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MSQRISILVALDGADEGLKRAITSAKRSLGELAASAKTSGDKAAAGLAQVKAGVSVIGEQ
VVAARTQVLAFLSINWAAGKVQEIVQVADAWNMMAARLKLATAGQREFTTAQTALFDIAQ
RIGVPIQETATLYGKLQQAVRMLGGEQQQALTITESISQALRISGASANETQSALLQFGQ
ALAAGVLRGEEFNSVVENSPRLAQALADGLNVPIGRLRKMAEEGRLTADVVVNALLSQKN
KLAAEYAQLPATVSQAFERLRNAFGQYINRIDQATGFSTKLSEALTWLAQNLDTVMCWLT
RIAEVGLAVLVYRLIPALITAWQTAGAAAVTAASATSAAWATANLSVSAAIASVGVLRTG
FATLGAFLVGWEIGTWLSEKFETVRRAGILMVEVLIRSVEELRFHWEVFAAIFTSDTIAE
ATKRHQARLGDMNRIFAQMVADAGRGTDAAKGAMNAAAGAAEEIAKRLEAVRQGTQEAVG
RGAEAVHTALEKLKSRIGEVEQAVSKASSTVNDATAKMAEAYKGLTSIIDGHLQRQVEAV
KARYQQEQAALERSGQAQAVQIATSTQLLVGALTQQTALRQQAATEALKLIDDESRARVD
AAAREGKTDAERAANVQRVENEILATRRQTLTQAASEYRQHIDVLNAEANRHLAEVRRIE
DEKRQLSMSTEERIRDIRRAGLSDYEAQEDRKRQIAEYQTSARAALADGEFDQARQRASK
AMDLAAQIASAQSSEAKRAEDARRQSEAAVTQVAQLEAQAREATGRREYAQAEALTRQAD
ELRAQSAQQAANADAQALHGKAAVNEAIGRIRDSQAILNQTLDAEAQAHQRAAQSAVSAR
QGIQQTLAQTDSQIALLTAKLQQGLKVTIDADTQRFDKAIADLDKALVERERLVVIKADL
EQAEKTLQDYEQRLKEGKTLPVDADVSKATATLDKLNAYARDNSQLELRVATEKARAAIA
NVEGMLRALDRVQTESRHRVASNVDAVRAEVQSLNGMNTSSTHTIAVRRVEANAAGGMVG
GGAQQFAEGGPVAPAFPRMTGGSVPGTGDQDTVPRTLDAGAFVIRKAAVRKYGAGTLAQL
ANGVARFATGGPVLFGGRGGIQPGGPKRNRDVVEARKMIDLGLQGMGDYASWAQHQGGAW
VSSDMRSRTMTNYGRQAERDRQSLDALAERKQLTAAERQTLERIKTTWRQAMAQPMLWGQ
DLERDLLDYMEQHQGEFYREGGVSSSDTVPAMLTPGEYVVNRQAVGRHGVAFFDAINNLA
LPARALVNTVRGYATGGLVQPLAGMAARASQAVSGAWNGADPAAALSQVLATSLRAPVPA
YTAEVAPARTIRVELASGGRTIAATIDARDEARLLELLKEAQSRAL
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaacgcatctccattcttgtcgccctcgatggtgccgacgagggcctcaaacgc
gctatcacatcggccaagcgcagcttgggagaactggcagcatccgccaagacatcaggc
gacaaggccgcggcgggcctcgcccaggtcaaggcgggagtgtccgtcatcggcgaacag
gtcgtcgcagccaggacccaggtgctggcttttctgtcgatcaactgggccgccggcaag
gtgcaggagatcgtgcaggtcgccgacgcttggaacatgatggccgcgcgcctcaagctt
gctaccgccggccagcgcgaattcaccaccgcgcagaccgcactgttcgatattgctcag
cgcatcggcgtgccgattcaggagaccgccacgctgtacggcaagctgcagcaggcggtg
cgcatgctcggcggcgagcagcagcaggcgctcaccatcacggagagcatctcgcaggcg
ctgcgcatctccggcgcctcggccaacgagacgcaatcggcgctgctgcagttcggccag
gcactggcggcaggcgtgttgcgcggcgaggagttcaactccgttgtcgagaacagcccc
cgcctcgcacaggccctggccgatggcttgaacgtgcccattggtcggctgcgcaagatg
gccgaggaaggccggctgaccgccgatgtggtcgtcaatgcgctgctgtcccagaaaaac
aagctcgccgccgaatatgcccagttgccggcgacggtcagtcaggcgttcgagcggctg
cgcaacgccttcgggcagtacatcaaccggatcgaccaggccaccggcttcagtaccaag
ctgtccgaggccctgacgtggctggcgcagaacctcgacacggtgatgtgctggctcacg
cgcatcgccgaagtcgggctggcggtgctcgtctaccggctgatccctgcgctgatcact
gcgtggcagaccgcaggcgccgctgccgtcacggcagccagtgctacctccgccgcctgg
gcgaccgccaacctgtcggtgtcggctgccattgccagcgtgggcgtgctcaggaccggt
ttcgccacgctgggcgcgttcctcgtcggctgggagatcggcacatggctgtcggagaag
ttcgagaccgtgcgccgcgccggcatcctcatggtcgaggtgctgatccggtcggttgag
gagttgcgctttcactgggaggtgttcgccgccatcttcacatccgacaccatcgcggag
gcgaccaagcgccatcaggcacggctgggcgacatgaaccggatcttcgcgcagatggtc
gccgatgccggccggggcacggatgcggccaagggcgccatgaacgcggcagccggcgcc
gccgaggagatcgccaagcgcctggaggcggtgcgccagggcacgcaggaggcggtgggc
cgcggcgccgaggcggtccacacagccctggagaaactcaagtcgcggatcggcgaggtc
gagcaggcggtctccaaggcgagctccacggtgaacgacgccaccgccaagatggccgag
gcgtacaaggggctcacctccatcattgatggccacctgcagcgccaggtcgaggcggtc
aaggcccgctaccagcaagagcaggcggcgctggagcgctcgggccaggcgcaggcggtg
cagatcgccacatcgacccaactgctggtcggggccctcacgcagcagacggcgttgcgc
cagcaggccgcgaccgaggcgttgaagctgatcgacgacgagtcccgcgcccgcgtcgat
gccgccgctcgcgaaggcaagaccgacgcagagcgcgcagccaacgtgcagcgggtcgag
aatgagattctggccacgcgccggcagacgctgacccaggcggcctccgagtaccgtcag
cacatcgacgtgctcaacgccgaggccaaccggcatctggccgaggtccggcgcatcgag
gacgagaagcggcagctgtcgatgtcgaccgaggagcgcatccgcgacatccgccgcgcg
gggctatcggactacgaggcgcaggaggaccgcaagcgccagatcgccgaataccagacc
agcgcccgagcagcgctggccgacggcgaattcgaccaagctcgccagcgcgccagcaag
gccatggacctggccgcccagatcgccagtgcccagtccagcgaggccaagcgtgccgag
gacgcgcgccggcagtcggaagcggcggtgacgcaagtggcccagctggaagcccaggcc
cgggaggcgaccggccgccgagagtacgcgcaggccgaagccctgacacggcaagcggat
gagctgcgcgcccaatcggcacagcaggcggcgaacgctgatgcccaggccctacacggc
aaggccgccgtcaacgaagccatcggccggatccgcgattcgcaggcgatcctcaatcaa
acactggatgcggaggcccaggcgcaccagcgcgccgcgcagtcggcggtgtcggcccgg
cagggcatccagcagacgctggcccagaccgacagccagatcgccctgctgacggccaag
ctgcagcaggggctcaaggtcaccatcgatgcagacactcagcgcttcgataaggccatc
gccgacctcgacaaggcactggtcgagcgcgagcggttggtggtcatcaaggcggatctg
gagcaggccgagaagacgctgcaggactatgagcagcgactcaaggaaggcaagaccctg
ccggtcgatgccgacgtgtccaaggccactgcgacgttggacaagctcaacgcctacgcc
cgcgacaactcacagctggagctgcgcgtcgctaccgagaaggcacgtgccgcgatcgcc
aacgtcgaaggcatgctgcgggcgctggaccgcgtacagaccgagtcgcgccaccgcgtc
gccagcaacgtcgatgccgtgcgcgccgaggtccagagcctgaacggcatgaacacgtcc
agcacgcacaccattgccgtgcgccgtgtcgaggcgaatgccgcgggcggtatggtcggc
ggcggcgcgcagcagttcgccgagggcggaccggtcgcgcccgccttcccgcgcatgacc
ggcggttcggtgccgggcacgggcgaccaggacacggtgccacgcacgctggacgccggc
gccttcgtgatccgcaaggccgcggtgcgcaagtacggcgcggggacgctcgcgcagctg
gccaacggcgtggcgcgcttcgccaccggcgggccagtgctgttcggggggcgtggcggc
atccagccgggcgggccgaagcgcaaccgcgacgtggtcgaggcccgcaagatgatcgac
ctcggcctgcagggcatgggcgactacgcctcctgggcgcagcaccagggcggcgcctgg
gtcagttcggacatgcgctcgcgcacgatgacgaactatggccggcaggccgagcgtgat
cggcagtcgctcgatgcgctggccgagcgcaagcaactgactgccgccgagcgccagacg
ctggagcggatcaagacgacctggcgccaggccatggcccagccgatgctgtggggccag
gatctggagcgcgacctgctcgactacatggagcagcaccagggcgagttttatcgggag
ggcggagtgtcgtcttcggacaccgtgcccgccatgctgacgcccggcgaatacgtggtg
aaccggcaggcggttgggcgccacggcgtggccttcttcgatgccatcaacaacctggcg
ctgccggcccgtgcgctggtgaacacagtccggggctacgccaccggcgggctcgtgcag
ccgctggcggggatggcagccagggcgtcgcaagcggtgtctggcgcctggaacggggcg
gatcctgcggcggcgctgtcgcaggtgctggccacctccttgcgcgcgccggtgcctgcc
tacacggcagaggtggcgcccgcccgcaccatccgtgtggaactggcctccggcggtcgg
acgatcgccgccaccatcgacgcccgcgacgaagcgcggctgctcgaactcctcaaagaa
gcccaatcccgggcgctgtaa
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